Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 AC008735.5-201ENST00000623544 497 ntBASIC20.72■□□□□ 0.91
USP17L11C9JVI0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP17L11C9JVI0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP17L11C9JVI0 AC135776.1-201ENST00000319817 2481 ntBASIC20.72■□□□□ 0.91
USP17L11C9JVI0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP17L11C9JVI0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
USP17L11C9JVI0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP17L11C9JVI0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.72■□□□□ 0.91
USP17L11C9JVI0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP17L11C9JVI0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP17L11C9JVI0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 MIR1233-2-201ENST00000408138 82 ntBASIC20.71■□□□□ 0.91
USP17L11C9JVI0 MIR1233-1-201ENST00000408722 82 ntBASIC20.71■□□□□ 0.91
USP17L11C9JVI0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 AC027601.4-201ENST00000611259 610 ntBASIC20.71■□□□□ 0.91
USP17L11C9JVI0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
USP17L11C9JVI0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.7■□□□□ 0.91
USP17L11C9JVI0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 AC107918.4-202ENST00000641623 219 ntBASIC20.7■□□□□ 0.9
USP17L11C9JVI0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
USP17L11C9JVI0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 AC090164.3-201ENST00000610780 2143 ntBASIC20.69■□□□□ 0.9
USP17L11C9JVI0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 AC093677.2-201ENST00000600169 1863 ntBASIC20.69■□□□□ 0.9
USP17L11C9JVI0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 AC096633.1-201ENST00000422446 749 ntBASIC20.69■□□□□ 0.9
USP17L11C9JVI0 PGAM5P1-201ENST00000518923 814 ntBASIC20.69■□□□□ 0.9
USP17L11C9JVI0 AC105339.3-201ENST00000560043 636 ntBASIC20.69■□□□□ 0.9
USP17L11C9JVI0 AC034105.1-201ENST00000563488 319 ntBASIC20.69■□□□□ 0.9
USP17L11C9JVI0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 FAM197Y3-203ENST00000618346 717 ntBASIC20.69■□□□□ 0.9
USP17L11C9JVI0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP17L11C9JVI0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms