Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 COX5BP2-201ENST00000392354 334 ntBASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 AC002056.1-201ENST00000395613 760 ntBASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 KRT18P32-201ENST00000424695 1287 ntBASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 AL592309.1-201ENST00000443127 649 ntBASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 RN7SL692P-201ENST00000464677 288 ntBASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 SPDYE22P-201ENST00000582158 798 ntBASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 SIRPAP1-201ENST00000448467 1770 ntBASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 AL355306.1-201ENST00000415580 579 ntBASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 AL671277.1-201ENST00000429656 993 ntBASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.66■□□□□ 0.9
TMEM88BA6NKF7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEM88BA6NKF7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM88BA6NKF7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.64■□□□□ 0.9
TMEM88BA6NKF7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM88BA6NKF7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM88BA6NKF7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM88BA6NKF7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM88BA6NKF7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM88BA6NKF7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM88BA6NKF7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM88BA6NKF7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM88BA6NKF7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM88BA6NKF7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TMEM88BA6NKF7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM88BA6NKF7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
TMEM88BA6NKF7 FAM58DP-201ENST00000428076 619 ntBASIC20.64■□□□□ 0.89
TMEM88BA6NKF7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM88BA6NKF7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.64■□□□□ 0.89
TMEM88BA6NKF7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.64■□□□□ 0.89
TMEM88BA6NKF7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.64■□□□□ 0.89
TMEM88BA6NKF7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM88BA6NKF7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM88BA6NKF7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM88BA6NKF7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM88BA6NKF7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM88BA6NKF7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.64■□□□□ 0.89
TMEM88BA6NKF7 AL049757.1-201ENST00000616842 1596 ntBASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 PIN1P1-201ENST00000412108 996 ntBASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.63■□□□□ 0.89
TMEM88BA6NKF7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms