Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 AL355312.1-201ENST00000407115 2176 ntBASIC12.76□□□□□ -0.37
LINC01549A6NIU2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 MIR564-202ENST00000385049 94 ntBASIC12.76□□□□□ -0.37
LINC01549A6NIU2 GXYLT1P2-201ENST00000433312 1230 ntBASIC12.76□□□□□ -0.37
LINC01549A6NIU2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 OR2A1-AS1-207ENST00000486094 819 ntBASIC12.76□□□□□ -0.37
LINC01549A6NIU2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 DUTP2-201ENST00000519164 463 ntBASIC12.76□□□□□ -0.37
LINC01549A6NIU2 AF201337.1-201ENST00000520239 748 ntBASIC12.76□□□□□ -0.37
LINC01549A6NIU2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 LINC01451-201ENST00000623792 534 ntBASIC12.76□□□□□ -0.37
LINC01549A6NIU2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 AC022898.2-201ENST00000616822 1312 ntBASIC12.76□□□□□ -0.37
LINC01549A6NIU2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 HLA-J-201ENST00000462773 1622 ntBASIC12.76□□□□□ -0.37
LINC01549A6NIU2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
LINC01549A6NIU2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 Z85996.1-201ENST00000494644 937 ntBASIC12.75□□□□□ -0.37
LINC01549A6NIU2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 AC116407.2-201ENST00000613639 860 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms