Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 PCDHA12-202ENST00000613593 2588 ntBASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 SLC25A1P2-201ENST00000430693 912 ntBASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 WWOX-216ENST00000569818 525 ntBASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 AC113410.3-201ENST00000623366 203 ntBASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GOLGA6L4A6NEF3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 AC080080.1-201ENST00000625121 2420 ntBASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 AL355312.1-201ENST00000407115 2176 ntBASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 AL024508.2-201ENST00000607749 1894 ntBASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 AL353719.1-201ENST00000566847 864 ntBASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 AP005242.2-201ENST00000580065 1175 ntBASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 AL049637.2-201ENST00000641778 930 ntBASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GOLGA6L4A6NEF3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 AC012618.2-201ENST00000428058 849 ntBASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 UBE2SP1-201ENST00000450587 669 ntBASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 AC104390.1-201ENST00000555663 520 ntBASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 MIR3180-4-201ENST00000582223 153 ntBASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GOLGA6L4A6NEF3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms