Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SBNO1A3KN83 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SBNO1A3KN83 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.11■■□□□ 1.45
SBNO1A3KN83 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SBNO1A3KN83 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC24.11■■□□□ 1.45
SBNO1A3KN83 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC24.11■■□□□ 1.45
SBNO1A3KN83 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
SBNO1A3KN83 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SBNO1A3KN83 AL139400.1-201ENST00000366220 510 ntBASIC24.11■■□□□ 1.45
SBNO1A3KN83 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC24.11■■□□□ 1.45
SBNO1A3KN83 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC24.11■■□□□ 1.45
SBNO1A3KN83 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC24.11■■□□□ 1.45
SBNO1A3KN83 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC24.11■■□□□ 1.45
SBNO1A3KN83 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC24.11■■□□□ 1.45
SBNO1A3KN83 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC24.11■■□□□ 1.45
SBNO1A3KN83 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC24.11■■□□□ 1.45
SBNO1A3KN83 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
SBNO1A3KN83 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SBNO1A3KN83 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SBNO1A3KN83 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SBNO1A3KN83 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC24.1■■□□□ 1.45
SBNO1A3KN83 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC24.1■■□□□ 1.45
SBNO1A3KN83 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
SBNO1A3KN83 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SBNO1A3KN83 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SBNO1A3KN83 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC24.1■■□□□ 1.45
SBNO1A3KN83 POLD4-207ENST00000531239 584 ntTSL 2 BASIC24.1■■□□□ 1.45
SBNO1A3KN83 RPL28-205ENST00000558131 444 ntTSL 5 BASIC24.1■■□□□ 1.45
SBNO1A3KN83 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
SBNO1A3KN83 AC096734.2-201ENST00000562054 433 ntBASIC24.1■■□□□ 1.45
SBNO1A3KN83 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC24.1■■□□□ 1.45
SBNO1A3KN83 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
SBNO1A3KN83 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SBNO1A3KN83 AL049757.1-201ENST00000616842 1596 ntBASIC24.1■■□□□ 1.45
SBNO1A3KN83 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC24.1■■□□□ 1.45
SBNO1A3KN83 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SBNO1A3KN83 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SBNO1A3KN83 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SBNO1A3KN83 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SBNO1A3KN83 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SBNO1A3KN83 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SBNO1A3KN83 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 NKTR-203ENST00000442970 646 ntTSL 2 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 CD63-210ENST00000550776 870 ntTSL 5 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 AC126763.1-201ENST00000552015 2118 ntBASIC24.09■■□□□ 1.45
SBNO1A3KN83 KRT19P2-202ENST00000557173 1012 ntBASIC24.09■■□□□ 1.45
SBNO1A3KN83 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SBNO1A3KN83 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SBNO1A3KN83 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SBNO1A3KN83 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SBNO1A3KN83 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
SBNO1A3KN83 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SBNO1A3KN83 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SBNO1A3KN83 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SBNO1A3KN83 WDR53-203ENST00000429115 683 ntTSL 2 BASIC24.08■■□□□ 1.45
SBNO1A3KN83 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SBNO1A3KN83 RHOQP3-201ENST00000437982 621 ntBASIC24.08■■□□□ 1.45
SBNO1A3KN83 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SBNO1A3KN83 BCRP1-201ENST00000444246 691 ntBASIC24.08■■□□□ 1.45
SBNO1A3KN83 ACTG1P14-201ENST00000446382 1122 ntBASIC24.08■■□□□ 1.45
SBNO1A3KN83 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC24.08■■□□□ 1.45
SBNO1A3KN83 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SBNO1A3KN83 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SBNO1A3KN83 CITED2-204ENST00000618718 901 ntTSL 2 BASIC24.08■■□□□ 1.45
SBNO1A3KN83 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SBNO1A3KN83 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SBNO1A3KN83 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
SBNO1A3KN83 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
SBNO1A3KN83 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SBNO1A3KN83 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
SBNO1A3KN83 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SBNO1A3KN83 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SBNO1A3KN83 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
SBNO1A3KN83 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
SBNO1A3KN83 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SBNO1A3KN83 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SBNO1A3KN83 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SBNO1A3KN83 MRPL20P1-201ENST00000400819 433 ntBASIC24.07■■□□□ 1.44
SBNO1A3KN83 KLF4P1-201ENST00000412782 1185 ntBASIC24.07■■□□□ 1.44
SBNO1A3KN83 S100A2-206ENST00000497140 697 ntTSL 2 BASIC24.07■■□□□ 1.44
SBNO1A3KN83 CCND1-203ENST00000536559 553 ntTSL 3 BASIC24.07■■□□□ 1.44
SBNO1A3KN83 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC24.07■■□□□ 1.44
SBNO1A3KN83 AL096865.1-201ENST00000606796 927 ntBASIC24.07■■□□□ 1.44
SBNO1A3KN83 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC24.07■■□□□ 1.44
SBNO1A3KN83 AC004877.2-201ENST00000623941 599 ntBASIC24.07■■□□□ 1.44
SBNO1A3KN83 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SBNO1A3KN83 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms