Protein–RNA interactions for Protein: Q9Y6R1

SLC4A4, Electrogenic sodium bicarbonate cotransporter 1, humanhuman

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A4Q9Y6R1 RNF165-205ENST00000588679 2904 ntBASIC21.34■■□□□ 1.01
SLC4A4Q9Y6R1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC4A4Q9Y6R1 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.34■■□□□ 1.01
SLC4A4Q9Y6R1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.34■■□□□ 1.01
SLC4A4Q9Y6R1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.34■■□□□ 1.01
SLC4A4Q9Y6R1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC4A4Q9Y6R1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
SLC4A4Q9Y6R1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SLC4A4Q9Y6R1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC4A4Q9Y6R1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SLC4A4Q9Y6R1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SLC4A4Q9Y6R1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 TPM4P1-201ENST00000436100 807 ntBASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 AC011467.2-201ENST00000598425 242 ntBASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
SLC4A4Q9Y6R1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.33■■□□□ 1
SLC4A4Q9Y6R1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.33■■□□□ 1
SLC4A4Q9Y6R1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SLC4A4Q9Y6R1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
SLC4A4Q9Y6R1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.33■■□□□ 1
SLC4A4Q9Y6R1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
SLC4A4Q9Y6R1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.33■■□□□ 1
SLC4A4Q9Y6R1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 AC135050.7-201ENST00000624508 2218 ntBASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 AC007967.3-201ENST00000434308 558 ntBASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC4A4Q9Y6R1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 AC097374.2-201ENST00000618617 1306 ntBASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 INTS4P1-201ENST00000438455 1935 ntBASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 FLJ13224-201ENST00000313737 1514 ntBASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 AL354751.1-201ENST00000412768 1863 ntBASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 AKR1C7P-201ENST00000305623 895 ntBASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 AC004870.1-201ENST00000315132 882 ntBASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 AC096633.1-201ENST00000422446 749 ntBASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC4A4Q9Y6R1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms