Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 AC004263.2-201ENST00000617183 678 ntBASIC20.48■□□□□ 0.87
CLIC4Q9Y696 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 AL031432.5-201ENST00000641059 760 ntBASIC20.48■□□□□ 0.87
CLIC4Q9Y696 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 AC020916.1-201ENST00000587762 1774 ntBASIC20.48■□□□□ 0.87
CLIC4Q9Y696 AC080080.1-201ENST00000625121 2420 ntBASIC20.48■□□□□ 0.87
CLIC4Q9Y696 KRT89P-201ENST00000620027 1478 ntBASIC20.48■□□□□ 0.87
CLIC4Q9Y696 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 STARP1-201ENST00000397973 869 ntBASIC20.47■□□□□ 0.87
CLIC4Q9Y696 BX664615.1-201ENST00000443558 458 ntBASIC20.47■□□□□ 0.87
CLIC4Q9Y696 KRT18P57-201ENST00000443599 1254 ntBASIC20.47■□□□□ 0.87
CLIC4Q9Y696 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLIC4Q9Y696 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 AC211429.1-201ENST00000415277 523 ntBASIC20.46■□□□□ 0.87
CLIC4Q9Y696 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 REXO1L11P-201ENST00000620964 1927 ntBASIC20.46■□□□□ 0.87
CLIC4Q9Y696 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC4Q9Y696 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.87
CLIC4Q9Y696 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 LINC00304-203ENST00000565008 1864 ntBASIC20.45■□□□□ 0.86
CLIC4Q9Y696 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 KRT18P65-201ENST00000439811 1286 ntBASIC20.45■□□□□ 0.86
CLIC4Q9Y696 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 AC133963.1-201ENST00000504166 1679 ntBASIC20.45■□□□□ 0.86
CLIC4Q9Y696 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC4Q9Y696 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC4Q9Y696 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms