Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 GMCL1P1-201ENST00000463439 1581 ntBASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 DRAXINP1-201ENST00000437611 948 ntBASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 NUS1P1-201ENST00000446295 882 ntBASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 FDX1P1-201ENST00000449115 551 ntBASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 GPR32P1-201ENST00000601788 811 ntBASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 AC018470.1-201ENST00000624790 3129 ntBASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HRH3Q9Y5N1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 AL732292.2-201ENST00000609649 430 ntBASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HRH3Q9Y5N1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms