Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 AC022898.2-201ENST00000616822 1312 ntBASIC21.08■□□□□ 0.97
SMC3Q9UQE7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 AC008687.5-201ENST00000593746 558 ntBASIC21.08■□□□□ 0.97
SMC3Q9UQE7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
SMC3Q9UQE7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
SMC3Q9UQE7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
SMC3Q9UQE7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.08■□□□□ 0.96
SMC3Q9UQE7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
SMC3Q9UQE7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
SMC3Q9UQE7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMC3Q9UQE7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 LINC00167-201ENST00000530583 1419 ntBASIC21.07■□□□□ 0.96
SMC3Q9UQE7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 MMP23A-201ENST00000234610 1017 ntBASIC21.07■□□□□ 0.96
SMC3Q9UQE7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 HMGA1P5-201ENST00000412453 271 ntBASIC21.07■□□□□ 0.96
SMC3Q9UQE7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 NEK4P2-201ENST00000580004 1012 ntBASIC21.07■□□□□ 0.96
SMC3Q9UQE7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
SMC3Q9UQE7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.06■□□□□ 0.96
SMC3Q9UQE7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 PRORSD1P-202ENST00000563365 2154 ntBASIC21.06■□□□□ 0.96
SMC3Q9UQE7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.06■□□□□ 0.96
SMC3Q9UQE7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms