Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 LINC00628-201ENST00000628516 1289 ntBASIC18.87■□□□□ 0.61
CHD7Q9P2D1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.87■□□□□ 0.61
CHD7Q9P2D1 AC063926.2-201ENST00000623766 1308 ntBASIC18.87■□□□□ 0.61
CHD7Q9P2D1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 MRPL20P1-201ENST00000400819 433 ntBASIC18.87■□□□□ 0.61
CHD7Q9P2D1 AC004790.2-201ENST00000623588 572 ntBASIC18.87■□□□□ 0.61
CHD7Q9P2D1 AL805961.1-202ENST00000641562 540 ntBASIC18.87■□□□□ 0.61
CHD7Q9P2D1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 CRYGEP-201ENST00000412192 528 ntBASIC18.87■□□□□ 0.61
CHD7Q9P2D1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 AC093214.1-201ENST00000511688 1107 ntBASIC18.87■□□□□ 0.61
CHD7Q9P2D1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD7Q9P2D1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD7Q9P2D1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 AC051619.7-201ENST00000568314 623 ntBASIC18.85■□□□□ 0.61
CHD7Q9P2D1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 BCAR1-209ENST00000546196 1340 ntBASIC18.85■□□□□ 0.61
CHD7Q9P2D1 AC100803.2-201ENST00000562459 1963 ntBASIC18.85■□□□□ 0.61
CHD7Q9P2D1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD7Q9P2D1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.84■□□□□ 0.61
CHD7Q9P2D1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 SIGLEC30P-201ENST00000455569 941 ntBASIC18.84■□□□□ 0.61
CHD7Q9P2D1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.84■□□□□ 0.61
CHD7Q9P2D1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms