Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 FITM1-202ENST00000559294 800 ntBASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 KRT8P50-201ENST00000562022 1438 ntBASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCM2LQ9NUG4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCM2LQ9NUG4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCM2LQ9NUG4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCM2LQ9NUG4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCM2LQ9NUG4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CCM2LQ9NUG4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCM2LQ9NUG4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCM2LQ9NUG4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CCM2LQ9NUG4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CCM2LQ9NUG4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.08■□□□□ 0.33
CCM2LQ9NUG4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCM2LQ9NUG4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 WWOX-216ENST00000569818 525 ntBASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 SDHAP2-201ENST00000455183 2001 ntBASIC17.08■□□□□ 0.32
CCM2LQ9NUG4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 LIN28AP1-201ENST00000429574 405 ntBASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 AL445675.2-201ENST00000620291 557 ntBASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 CR392000.1-201ENST00000624770 1228 ntBASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 CROCCP2-202ENST00000412962 2773 ntBASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.07■□□□□ 0.32
CCM2LQ9NUG4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms