Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 HOXB1-202ENST00000577092 1414 ntBASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 RPS2P55-201ENST00000397318 883 ntBASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 AL355355.2-201ENST00000442321 338 ntBASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 AC107956.1-201ENST00000494359 873 ntBASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 AC233702.5-201ENST00000584107 538 ntBASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 AL163051.1-201ENST00000569214 1512 ntBASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB16Q9NRJ7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 CRYGFP-201ENST00000418459 633 ntBASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHB16Q9NRJ7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 TSPY17P-201ENST00000450329 467 ntBASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 AC008550.1-201ENST00000511500 884 ntBASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
PCDHB16Q9NRJ7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms