Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 MTCL1P1-201ENST00000446207 792 ntBASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 DUTP2-201ENST00000519164 463 ntBASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 AC125634.1-201ENST00000438758 1403 ntBASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM7Q9NR12 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 AC023274.1-201ENST00000418278 595 ntBASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 AP006288.1-201ENST00000446065 395 ntBASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 MIR3197-201ENST00000582241 73 ntBASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 AC107918.4-202ENST00000641623 219 ntBASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM7Q9NR12 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 AC211486.1-202ENST00000416371 468 ntBASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 AC211476.1-201ENST00000503899 468 ntBASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 KRT18P28-201ENST00000453838 1332 ntBASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM7Q9NR12 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 METTL21AP1-201ENST00000438852 635 ntBASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM7Q9NR12 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms