Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 AC005082.1-201ENST00000413042 2259 ntBASIC18.54■□□□□ 0.56
HPS4Q9NQG7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 KRT18P65-201ENST00000439811 1286 ntBASIC18.54■□□□□ 0.56
HPS4Q9NQG7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 AC073648.2-201ENST00000510116 352 ntBASIC18.54■□□□□ 0.56
HPS4Q9NQG7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HPS4Q9NQG7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS4Q9NQG7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 SCARNA2-201ENST00000458748 420 ntBASIC18.52■□□□□ 0.56
HPS4Q9NQG7 AC093909.1-201ENST00000504731 1122 ntBASIC18.52■□□□□ 0.56
HPS4Q9NQG7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 AC139887.3-201ENST00000568585 713 ntBASIC18.52■□□□□ 0.56
HPS4Q9NQG7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 HTR7P1-202ENST00000624664 4411 ntBASIC18.52■□□□□ 0.56
HPS4Q9NQG7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HPS4Q9NQG7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms