Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 HMGA1P5-201ENST00000412453 271 ntBASIC13.01□□□□□ -0.33
C9orf85Q96MD7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 NAPSB-206ENST00000562112 1266 ntBASIC13.01□□□□□ -0.33
C9orf85Q96MD7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 FAM87A-204ENST00000613235 858 ntBASIC13.01□□□□□ -0.33
C9orf85Q96MD7 AC010947.1-201ENST00000623454 693 ntBASIC13.01□□□□□ -0.33
C9orf85Q96MD7 CYP2D8P-201ENST00000433633 1490 ntBASIC13.01□□□□□ -0.33
C9orf85Q96MD7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 HLA-J-201ENST00000462773 1622 ntBASIC13.01□□□□□ -0.33
C9orf85Q96MD7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C9orf85Q96MD7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
C9orf85Q96MD7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
C9orf85Q96MD7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13□□□□□ -0.33
C9orf85Q96MD7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13□□□□□ -0.33
C9orf85Q96MD7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
C9orf85Q96MD7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13□□□□□ -0.33
C9orf85Q96MD7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13□□□□□ -0.33
C9orf85Q96MD7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13□□□□□ -0.33
C9orf85Q96MD7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13□□□□□ -0.33
C9orf85Q96MD7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13□□□□□ -0.33
C9orf85Q96MD7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13□□□□□ -0.33
C9orf85Q96MD7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
C9orf85Q96MD7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
C9orf85Q96MD7 AP000523.1-201ENST00000398242 1049 ntBASIC13□□□□□ -0.33
C9orf85Q96MD7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13□□□□□ -0.33
C9orf85Q96MD7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13□□□□□ -0.33
C9orf85Q96MD7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13□□□□□ -0.33
C9orf85Q96MD7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13□□□□□ -0.33
C9orf85Q96MD7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13□□□□□ -0.33
C9orf85Q96MD7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13□□□□□ -0.33
C9orf85Q96MD7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13□□□□□ -0.33
C9orf85Q96MD7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13□□□□□ -0.33
C9orf85Q96MD7 AP006294.2-201ENST00000641667 209 ntBASIC13□□□□□ -0.33
C9orf85Q96MD7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13□□□□□ -0.33
C9orf85Q96MD7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
C9orf85Q96MD7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 LINC00602-201ENST00000629776 2065 ntBASIC13□□□□□ -0.33
C9orf85Q96MD7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13□□□□□ -0.33
C9orf85Q96MD7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C9orf85Q96MD7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 KRT8P9-201ENST00000558927 1449 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms