Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CALR3Q96L12 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.98■□□□□ 0.63
CALR3Q96L12 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CALR3Q96L12 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CALR3Q96L12 KRT89P-201ENST00000620027 1478 ntBASIC18.98■□□□□ 0.63
CALR3Q96L12 AD000864.1-201ENST00000624076 2295 ntBASIC18.98■□□□□ 0.63
CALR3Q96L12 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CALR3Q96L12 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CALR3Q96L12 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CALR3Q96L12 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CALR3Q96L12 AL355312.1-201ENST00000407115 2176 ntBASIC18.98■□□□□ 0.63
CALR3Q96L12 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CALR3Q96L12 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.98■□□□□ 0.63
CALR3Q96L12 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CALR3Q96L12 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CALR3Q96L12 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.98■□□□□ 0.63
CALR3Q96L12 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CALR3Q96L12 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CALR3Q96L12 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.98■□□□□ 0.63
CALR3Q96L12 DDX43P3-201ENST00000441064 443 ntBASIC18.98■□□□□ 0.63
CALR3Q96L12 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CALR3Q96L12 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.98■□□□□ 0.63
CALR3Q96L12 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CALR3Q96L12 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.98■□□□□ 0.63
CALR3Q96L12 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.98■□□□□ 0.63
CALR3Q96L12 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.98■□□□□ 0.63
CALR3Q96L12 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.98■□□□□ 0.63
CALR3Q96L12 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.98■□□□□ 0.63
CALR3Q96L12 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CALR3Q96L12 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CALR3Q96L12 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CALR3Q96L12 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CALR3Q96L12 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CALR3Q96L12 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CALR3Q96L12 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CALR3Q96L12 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CALR3Q96L12 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CALR3Q96L12 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CALR3Q96L12 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CALR3Q96L12 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CALR3Q96L12 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.97■□□□□ 0.63
CALR3Q96L12 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CALR3Q96L12 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.97■□□□□ 0.63
CALR3Q96L12 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
CALR3Q96L12 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CALR3Q96L12 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CALR3Q96L12 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CALR3Q96L12 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.97■□□□□ 0.63
CALR3Q96L12 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CALR3Q96L12 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.97■□□□□ 0.63
CALR3Q96L12 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CALR3Q96L12 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.97■□□□□ 0.63
CALR3Q96L12 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CALR3Q96L12 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.97■□□□□ 0.63
CALR3Q96L12 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CALR3Q96L12 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CALR3Q96L12 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CALR3Q96L12 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CALR3Q96L12 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CALR3Q96L12 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.97■□□□□ 0.63
CALR3Q96L12 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.97■□□□□ 0.63
CALR3Q96L12 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.96■□□□□ 0.63
CALR3Q96L12 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.96■□□□□ 0.63
CALR3Q96L12 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CALR3Q96L12 AP001094.4-201ENST00000579008 2176 ntBASIC18.96■□□□□ 0.63
CALR3Q96L12 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALR3Q96L12 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CALR3Q96L12 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CALR3Q96L12 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALR3Q96L12 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CALR3Q96L12 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CALR3Q96L12 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CALR3Q96L12 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CALR3Q96L12 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALR3Q96L12 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALR3Q96L12 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CALR3Q96L12 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CALR3Q96L12 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CALR3Q96L12 AL390955.1-201ENST00000428694 934 ntBASIC18.96■□□□□ 0.63
CALR3Q96L12 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.96■□□□□ 0.63
CALR3Q96L12 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CALR3Q96L12 AC009947.2-201ENST00000444014 672 ntBASIC18.96■□□□□ 0.63
CALR3Q96L12 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.96■□□□□ 0.63
CALR3Q96L12 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.96■□□□□ 0.63
CALR3Q96L12 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.96■□□□□ 0.63
CALR3Q96L12 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CALR3Q96L12 AC024243.1-201ENST00000609234 778 ntBASIC18.96■□□□□ 0.63
CALR3Q96L12 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.96■□□□□ 0.63
CALR3Q96L12 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CALR3Q96L12 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALR3Q96L12 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CALR3Q96L12 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALR3Q96L12 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALR3Q96L12 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.96■□□□□ 0.63
CALR3Q96L12 LINC00304-203ENST00000565008 1864 ntBASIC18.96■□□□□ 0.63
CALR3Q96L12 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALR3Q96L12 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALR3Q96L12 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.96■□□□□ 0.63
CALR3Q96L12 LINC00602-201ENST00000629776 2065 ntBASIC18.96■□□□□ 0.63
CALR3Q96L12 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms