Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 AC079328.2-201ENST00000561241 3354 ntBASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 AC106886.4-201ENST00000623557 2502 ntBASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 LINC00167-201ENST00000530583 1419 ntBASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 AC012618.2-201ENST00000428058 849 ntBASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 AC010240.3-201ENST00000607688 395 ntBASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 AC133963.1-201ENST00000504166 1679 ntBASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHAMP1Q96JM3 KRT8P9-201ENST00000558927 1449 ntBASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 AC009949.1-201ENST00000623048 1830 ntBASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 PCDH8P1-201ENST00000428983 2773 ntBASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHAMP1Q96JM3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 SEC1P-202ENST00000473944 940 ntBASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHAMP1Q96JM3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CHAMP1Q96JM3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CHAMP1Q96JM3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHAMP1Q96JM3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.77■□□□□ 0.91
CHAMP1Q96JM3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CHAMP1Q96JM3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms