Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.31■■□□□ 1
DDX11Q96FC9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.31■■□□□ 1
DDX11Q96FC9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.31■■□□□ 1
DDX11Q96FC9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.31■■□□□ 1
DDX11Q96FC9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.31■■□□□ 1
DDX11Q96FC9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
DDX11Q96FC9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.31■■□□□ 1
DDX11Q96FC9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
DDX11Q96FC9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
DDX11Q96FC9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
DDX11Q96FC9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.31■■□□□ 1
DDX11Q96FC9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX11Q96FC9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX11Q96FC9 KRT18P1-202ENST00000452408 1331 ntBASIC21.3■■□□□ 1
DDX11Q96FC9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX11Q96FC9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
DDX11Q96FC9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX11Q96FC9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.3■■□□□ 1
DDX11Q96FC9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
DDX11Q96FC9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX11Q96FC9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX11Q96FC9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
DDX11Q96FC9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.3■■□□□ 1
DDX11Q96FC9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX11Q96FC9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
DDX11Q96FC9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX11Q96FC9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX11Q96FC9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
DDX11Q96FC9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
DDX11Q96FC9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.3■■□□□ 1
DDX11Q96FC9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX11Q96FC9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.3■■□□□ 1
DDX11Q96FC9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX11Q96FC9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX11Q96FC9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
DDX11Q96FC9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.3■■□□□ 1
DDX11Q96FC9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX11Q96FC9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX11Q96FC9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX11Q96FC9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.29■■□□□ 1
DDX11Q96FC9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.29■■□□□ 1
DDX11Q96FC9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX11Q96FC9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.29■■□□□ 1
DDX11Q96FC9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX11Q96FC9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX11Q96FC9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX11Q96FC9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX11Q96FC9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX11Q96FC9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX11Q96FC9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
DDX11Q96FC9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX11Q96FC9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.29■■□□□ 1
DDX11Q96FC9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.29■■□□□ 1
DDX11Q96FC9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.29■■□□□ 1
DDX11Q96FC9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX11Q96FC9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.29■■□□□ 1
DDX11Q96FC9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX11Q96FC9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX11Q96FC9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX11Q96FC9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 AL024508.2-201ENST00000607749 1894 ntBASIC21.28■■□□□ 1
DDX11Q96FC9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.28■■□□□ 1
DDX11Q96FC9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
DDX11Q96FC9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.28■■□□□ 1
DDX11Q96FC9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
DDX11Q96FC9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 RNF126P1-202ENST00000569893 925 ntBASIC21.28■■□□□ 1
DDX11Q96FC9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
DDX11Q96FC9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
DDX11Q96FC9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX11Q96FC9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
DDX11Q96FC9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.27■■□□□ 1
DDX11Q96FC9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms