Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 AP000525.1-201ENST00000608286 694 ntBASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 AC011676.5-201ENST00000624864 2660 ntBASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 REXO1L11P-201ENST00000620964 1927 ntBASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 AL390955.1-201ENST00000428694 934 ntBASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 AP006294.2-201ENST00000641667 209 ntBASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC44A1Q8WWI5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 AC024243.1-201ENST00000609234 778 ntBASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 LINC01451-201ENST00000623792 534 ntBASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 AC009949.1-201ENST00000623048 1830 ntBASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC44A1Q8WWI5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 TSPY14P-201ENST00000303979 915 ntBASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 C2orf69P3-201ENST00000565542 1120 ntBASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms