Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 KRT8P26-201ENST00000534154 1276 ntBASIC19.19■□□□□ 0.66
LMO3Q8TAP4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 AL645608.8-201ENST00000606034 2086 ntBASIC19.19■□□□□ 0.66
LMO3Q8TAP4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LMO3Q8TAP4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 AC139713.2-201ENST00000641328 2723 ntBASIC19.18■□□□□ 0.66
LMO3Q8TAP4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 AC097374.2-201ENST00000618617 1306 ntBASIC19.18■□□□□ 0.66
LMO3Q8TAP4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMO3Q8TAP4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 AL592071.1-201ENST00000611956 408 ntBASIC19.17■□□□□ 0.66
LMO3Q8TAP4 AL590326.2-201ENST00000625139 305 ntBASIC19.17■□□□□ 0.66
LMO3Q8TAP4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 HLA-J-201ENST00000462773 1622 ntBASIC19.17■□□□□ 0.66
LMO3Q8TAP4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 AC016734.2-201ENST00000624325 1377 ntBASIC19.17■□□□□ 0.66
LMO3Q8TAP4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.17■□□□□ 0.66
LMO3Q8TAP4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 AC010460.3-201ENST00000511359 1579 ntBASIC19.16■□□□□ 0.66
LMO3Q8TAP4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 GUSBP12-201ENST00000513727 720 ntBASIC19.16■□□□□ 0.66
LMO3Q8TAP4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 LINC01451-201ENST00000623792 534 ntBASIC19.16■□□□□ 0.66
LMO3Q8TAP4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms