Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 NFYC-AS1-201ENST00000606277 1687 ntBASIC5.55□□□□□ -1.52
SYNE1Q8NF91 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 AC068472.1-201ENST00000474589 881 ntBASIC5.55□□□□□ -1.52
SYNE1Q8NF91 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 AL020996.1-203ENST00000536896 2307 ntBASIC5.55□□□□□ -1.52
SYNE1Q8NF91 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 AC034232.1-201ENST00000506026 1064 ntBASIC5.55□□□□□ -1.52
SYNE1Q8NF91 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 BAALC-202ENST00000306391 243 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 BAALC-204ENST00000330955 222 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 MIR940-201ENST00000401276 94 ntBASIC5.55□□□□□ -1.52
SYNE1Q8NF91 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 AL357033.4-201ENST00000617703 1807 ntBASIC5.55□□□□□ -1.52
SYNE1Q8NF91 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE1Q8NF91 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 TSSC2-201ENST00000450217 709 ntBASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AC092865.5-201ENST00000545435 363 ntBASIC5.54□□□□□ -1.52
SYNE1Q8NF91 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 MIR5100-201ENST00000579544 119 ntBASIC5.54□□□□□ -1.52
SYNE1Q8NF91 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 NSUN5P1-202ENST00000421140 1535 ntBASIC5.54□□□□□ -1.52
SYNE1Q8NF91 NSUN5P2-203ENST00000457352 1529 ntBASIC5.54□□□□□ -1.52
SYNE1Q8NF91 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms