Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SLC17A8Q8NDX2 AL024508.2-201ENST00000607749 1894 ntBASIC20.15■□□□□ 0.82
SLC17A8Q8NDX2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC17A8Q8NDX2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC17A8Q8NDX2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC17A8Q8NDX2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SLC17A8Q8NDX2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC17A8Q8NDX2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC17A8Q8NDX2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC17A8Q8NDX2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC17A8Q8NDX2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC17A8Q8NDX2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
SLC17A8Q8NDX2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 AC079602.3-201ENST00000623931 403 ntBASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC17A8Q8NDX2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 AC113404.2-201ENST00000507884 177 ntBASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 AL049840.3-201ENST00000602669 611 ntBASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 AC024563.2-201ENST00000603282 481 ntBASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 ESPNP-201ENST00000270691 2015 ntBASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC17A8Q8NDX2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 AC211486.1-202ENST00000416371 468 ntBASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 AC211476.1-201ENST00000503899 468 ntBASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 SPCS2P1-201ENST00000561636 679 ntBASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
SLC17A8Q8NDX2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms