Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
ABCA6Q8N139 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC26.36■■□□□ 1.81
ABCA6Q8N139 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ABCA6Q8N139 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ABCA6Q8N139 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
ABCA6Q8N139 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC26.36■■□□□ 1.81
ABCA6Q8N139 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ABCA6Q8N139 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
ABCA6Q8N139 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC26.36■■□□□ 1.81
ABCA6Q8N139 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC26.36■■□□□ 1.81
ABCA6Q8N139 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC26.36■■□□□ 1.81
ABCA6Q8N139 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ABCA6Q8N139 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ABCA6Q8N139 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ABCA6Q8N139 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
ABCA6Q8N139 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC26.36■■□□□ 1.81
ABCA6Q8N139 AC138761.1-201ENST00000584393 385 ntBASIC26.36■■□□□ 1.81
ABCA6Q8N139 AJ011932.1-201ENST00000621707 465 ntBASIC26.36■■□□□ 1.81
ABCA6Q8N139 AC105339.1-204ENST00000636249 355 ntBASIC26.36■■□□□ 1.81
ABCA6Q8N139 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ABCA6Q8N139 AC092919.2-201ENST00000623631 1645 ntBASIC26.35■■□□□ 1.81
ABCA6Q8N139 AC073130.3-201ENST00000624389 2278 ntBASIC26.35■■□□□ 1.81
ABCA6Q8N139 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ABCA6Q8N139 SLBP-205ENST00000488267 987 ntTSL 2 BASIC26.35■■□□□ 1.81
ABCA6Q8N139 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ABCA6Q8N139 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
ABCA6Q8N139 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA6Q8N139 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA6Q8N139 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA6Q8N139 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA6Q8N139 AC025580.3-201ENST00000617932 1424 ntBASIC26.34■■□□□ 1.81
ABCA6Q8N139 AC093520.2-201ENST00000561830 333 ntBASIC26.34■■□□□ 1.81
ABCA6Q8N139 CYB561-216ENST00000582297 897 ntTSL 3 BASIC26.34■■□□□ 1.81
ABCA6Q8N139 Z92544.3-201ENST00000624747 417 ntBASIC26.34■■□□□ 1.81
ABCA6Q8N139 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA6Q8N139 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA6Q8N139 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA6Q8N139 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC26.34■■□□□ 1.81
ABCA6Q8N139 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ABCA6Q8N139 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
ABCA6Q8N139 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
ABCA6Q8N139 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
ABCA6Q8N139 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ABCA6Q8N139 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
ABCA6Q8N139 COX5BP2-201ENST00000392354 334 ntBASIC26.33■■□□□ 1.81
ABCA6Q8N139 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ABCA6Q8N139 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC26.33■■□□□ 1.81
ABCA6Q8N139 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC26.33■■□□□ 1.81
ABCA6Q8N139 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC26.33■■□□□ 1.81
ABCA6Q8N139 IGHV3OR16-6-201ENST00000568775 360 ntBASIC26.33■■□□□ 1.81
ABCA6Q8N139 AC004835.2-201ENST00000603762 682 ntBASIC26.33■■□□□ 1.81
ABCA6Q8N139 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ABCA6Q8N139 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ABCA6Q8N139 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC26.33■■□□□ 1.8
ABCA6Q8N139 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ABCA6Q8N139 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
ABCA6Q8N139 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC26.32■■□□□ 1.8
ABCA6Q8N139 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC26.32■■□□□ 1.8
ABCA6Q8N139 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ABCA6Q8N139 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC26.32■■□□□ 1.8
ABCA6Q8N139 AL353135.1-201ENST00000606729 504 ntBASIC26.32■■□□□ 1.8
ABCA6Q8N139 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC26.32■■□□□ 1.8
ABCA6Q8N139 AC006116.8-202ENST00000587620 1550 ntBASIC26.32■■□□□ 1.8
ABCA6Q8N139 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC26.32■■□□□ 1.8
ABCA6Q8N139 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ABCA6Q8N139 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ABCA6Q8N139 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC26.32■■□□□ 1.8
ABCA6Q8N139 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
ABCA6Q8N139 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ABCA6Q8N139 COPE-202ENST00000349893 948 ntTSL 2 BASIC26.32■■□□□ 1.8
ABCA6Q8N139 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC26.32■■□□□ 1.8
ABCA6Q8N139 RBM7-207ENST00000544582 692 ntTSL 3 BASIC26.32■■□□□ 1.8
ABCA6Q8N139 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC26.32■■□□□ 1.8
ABCA6Q8N139 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
ABCA6Q8N139 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
ABCA6Q8N139 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
ABCA6Q8N139 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
ABCA6Q8N139 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
ABCA6Q8N139 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
ABCA6Q8N139 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA6Q8N139 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA6Q8N139 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA6Q8N139 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA6Q8N139 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA6Q8N139 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA6Q8N139 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA6Q8N139 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC26.31■■□□□ 1.8
ABCA6Q8N139 INO80C-206ENST00000586489 594 ntTSL 3 BASIC26.31■■□□□ 1.8
ABCA6Q8N139 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
ABCA6Q8N139 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC26.31■■□□□ 1.8
ABCA6Q8N139 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA6Q8N139 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA6Q8N139 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA6Q8N139 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA6Q8N139 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA6Q8N139 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA6Q8N139 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC26.3■■□□□ 1.8
ABCA6Q8N139 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA6Q8N139 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA6Q8N139 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms