Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 AC022898.2-201ENST00000616822 1312 ntBASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 AC026471.1-201ENST00000564629 3026 ntBASIC16.94■□□□□ 0.3
CCDC116Q8IYX3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 AC100803.2-201ENST00000562459 1963 ntBASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCDC116Q8IYX3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 AL671277.2-201ENST00000458060 996 ntBASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 PKD1P1-201ENST00000458669 6805 ntBASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CCDC116Q8IYX3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 GNAS-203ENST00000306120 1878 ntBASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 IGHGP-201ENST00000390555 1178 ntBASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC116Q8IYX3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms