Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.82■□□□□ 0.44
APLFQ8IW19 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
APLFQ8IW19 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.82■□□□□ 0.44
APLFQ8IW19 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
APLFQ8IW19 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.82■□□□□ 0.44
APLFQ8IW19 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 KRT8P41-201ENST00000533985 1514 ntBASIC17.82■□□□□ 0.44
APLFQ8IW19 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
APLFQ8IW19 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APLFQ8IW19 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.82■□□□□ 0.44
APLFQ8IW19 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.82■□□□□ 0.44
APLFQ8IW19 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.81■□□□□ 0.44
APLFQ8IW19 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.81■□□□□ 0.44
APLFQ8IW19 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.81■□□□□ 0.44
APLFQ8IW19 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
APLFQ8IW19 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
APLFQ8IW19 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
APLFQ8IW19 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.81■□□□□ 0.44
APLFQ8IW19 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.81■□□□□ 0.44
APLFQ8IW19 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 AC116407.4-201ENST00000623319 1061 ntBASIC17.81■□□□□ 0.44
APLFQ8IW19 AL023973.1-201ENST00000624619 620 ntBASIC17.81■□□□□ 0.44
APLFQ8IW19 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
APLFQ8IW19 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.81■□□□□ 0.44
APLFQ8IW19 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
APLFQ8IW19 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
APLFQ8IW19 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APLFQ8IW19 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.81■□□□□ 0.44
APLFQ8IW19 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APLFQ8IW19 TEX21P-204ENST00000641479 1693 ntBASIC17.8■□□□□ 0.44
APLFQ8IW19 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APLFQ8IW19 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APLFQ8IW19 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.8■□□□□ 0.44
APLFQ8IW19 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.8■□□□□ 0.44
APLFQ8IW19 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.8■□□□□ 0.44
APLFQ8IW19 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APLFQ8IW19 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APLFQ8IW19 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.8■□□□□ 0.44
APLFQ8IW19 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APLFQ8IW19 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
APLFQ8IW19 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.8■□□□□ 0.44
APLFQ8IW19 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
APLFQ8IW19 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
APLFQ8IW19 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.8■□□□□ 0.44
APLFQ8IW19 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.8■□□□□ 0.44
APLFQ8IW19 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.8■□□□□ 0.44
APLFQ8IW19 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.8■□□□□ 0.44
APLFQ8IW19 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.8■□□□□ 0.44
APLFQ8IW19 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.8■□□□□ 0.44
APLFQ8IW19 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.8■□□□□ 0.44
APLFQ8IW19 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.8■□□□□ 0.44
APLFQ8IW19 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.8■□□□□ 0.44
APLFQ8IW19 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
APLFQ8IW19 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.8■□□□□ 0.44
APLFQ8IW19 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
APLFQ8IW19 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
APLFQ8IW19 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APLFQ8IW19 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APLFQ8IW19 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APLFQ8IW19 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
APLFQ8IW19 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.8■□□□□ 0.44
APLFQ8IW19 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
APLFQ8IW19 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.8■□□□□ 0.44
APLFQ8IW19 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.8■□□□□ 0.44
APLFQ8IW19 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APLFQ8IW19 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.79■□□□□ 0.44
APLFQ8IW19 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.79■□□□□ 0.44
APLFQ8IW19 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.79■□□□□ 0.44
APLFQ8IW19 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
APLFQ8IW19 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
APLFQ8IW19 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.79■□□□□ 0.44
APLFQ8IW19 AC005332.1-201ENST00000577698 1310 ntBASIC17.79■□□□□ 0.44
APLFQ8IW19 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
APLFQ8IW19 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
APLFQ8IW19 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
APLFQ8IW19 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
APLFQ8IW19 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms