Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC00346Q8IVM7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 AC106820.2-201ENST00000563775 3264 ntBASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 PVRIG2P-201ENST00000435460 978 ntBASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 LINC00602-201ENST00000629776 2065 ntBASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.91■□□□□ 0.14
LINC00346Q8IVM7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 AC140113.3-201ENST00000605663 199 ntBASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00346Q8IVM7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 AC034232.1-201ENST00000506026 1064 ntBASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC00346Q8IVM7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms