Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 LINC01311-201ENST00000565162 1445 ntBASIC17.93■□□□□ 0.46
LDB1Q86U70 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.93■□□□□ 0.46
LDB1Q86U70 FAM8A6P-201ENST00000407496 1135 ntBASIC17.93■□□□□ 0.46
LDB1Q86U70 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.93■□□□□ 0.46
LDB1Q86U70 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.93■□□□□ 0.46
LDB1Q86U70 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 AC022616.7-201ENST00000525383 220 ntBASIC17.93■□□□□ 0.46
LDB1Q86U70 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.93■□□□□ 0.46
LDB1Q86U70 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LDB1Q86U70 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LDB1Q86U70 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LDB1Q86U70 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.93■□□□□ 0.46
LDB1Q86U70 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.93■□□□□ 0.46
LDB1Q86U70 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LDB1Q86U70 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB1Q86U70 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB1Q86U70 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LDB1Q86U70 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB1Q86U70 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB1Q86U70 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.92■□□□□ 0.46
LDB1Q86U70 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.92■□□□□ 0.46
LDB1Q86U70 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB1Q86U70 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.92■□□□□ 0.46
LDB1Q86U70 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LDB1Q86U70 SPDYE13P-201ENST00000445314 798 ntBASIC17.92■□□□□ 0.46
LDB1Q86U70 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.92■□□□□ 0.46
LDB1Q86U70 AC008687.5-201ENST00000593746 558 ntBASIC17.92■□□□□ 0.46
LDB1Q86U70 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB1Q86U70 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB1Q86U70 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB1Q86U70 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.92■□□□□ 0.46
LDB1Q86U70 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LDB1Q86U70 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LDB1Q86U70 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.92■□□□□ 0.46
LDB1Q86U70 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB1Q86U70 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LDB1Q86U70 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.91■□□□□ 0.46
LDB1Q86U70 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
LDB1Q86U70 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LDB1Q86U70 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.91■□□□□ 0.46
LDB1Q86U70 AC106820.2-201ENST00000563775 3264 ntBASIC17.91■□□□□ 0.46
LDB1Q86U70 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LDB1Q86U70 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.91■□□□□ 0.46
LDB1Q86U70 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
LDB1Q86U70 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.91■□□□□ 0.46
LDB1Q86U70 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LDB1Q86U70 AC113404.2-201ENST00000507884 177 ntBASIC17.91■□□□□ 0.46
LDB1Q86U70 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.91■□□□□ 0.46
LDB1Q86U70 ZNF444P1-201ENST00000559497 298 ntBASIC17.91■□□□□ 0.46
LDB1Q86U70 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.91■□□□□ 0.46
LDB1Q86U70 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.91■□□□□ 0.46
LDB1Q86U70 AC083849.1-201ENST00000615227 514 ntBASIC17.91■□□□□ 0.46
LDB1Q86U70 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LDB1Q86U70 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.91■□□□□ 0.46
LDB1Q86U70 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LDB1Q86U70 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.91■□□□□ 0.46
LDB1Q86U70 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LDB1Q86U70 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.91■□□□□ 0.46
LDB1Q86U70 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB1Q86U70 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB1Q86U70 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB1Q86U70 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB1Q86U70 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB1Q86U70 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB1Q86U70 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.9■□□□□ 0.46
LDB1Q86U70 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB1Q86U70 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB1Q86U70 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB1Q86U70 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB1Q86U70 KRT89P-201ENST00000620027 1478 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms