Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 AC096633.1-201ENST00000422446 749 ntBASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 GUSBP12-201ENST00000513727 720 ntBASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 AC090616.6-201ENST00000582640 721 ntBASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 AC116407.4-201ENST00000623319 1061 ntBASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 AC097374.2-201ENST00000618617 1306 ntBASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 AC005332.8-201ENST00000622750 2735 ntBASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COLCA1Q6ZS62 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 AC133963.1-201ENST00000504166 1679 ntBASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COLCA1Q6ZS62 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COLCA1Q6ZS62 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms