Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHC4Q6S5L8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 AL138688.1-201ENST00000624851 1594 ntBASIC20.22■□□□□ 0.83
SHC4Q6S5L8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.22■□□□□ 0.83
SHC4Q6S5L8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 AC106820.2-201ENST00000563775 3264 ntBASIC20.21■□□□□ 0.83
SHC4Q6S5L8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 KRT18P48-201ENST00000434763 852 ntBASIC20.21■□□□□ 0.83
SHC4Q6S5L8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 AC006011.2-201ENST00000621313 1158 ntBASIC20.21■□□□□ 0.83
SHC4Q6S5L8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 CROCCP2-202ENST00000412962 2773 ntBASIC20.21■□□□□ 0.83
SHC4Q6S5L8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC4Q6S5L8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.2■□□□□ 0.83
SHC4Q6S5L8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.2■□□□□ 0.83
SHC4Q6S5L8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 HLA-J-201ENST00000462773 1622 ntBASIC20.2■□□□□ 0.82
SHC4Q6S5L8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms