Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 NUS1P2-201ENST00000417358 873 ntBASIC15.75■□□□□ 0.11
FREM1Q5H8C1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 IGHV3-41-201ENST00000613121 348 ntBASIC15.74■□□□□ 0.11
FREM1Q5H8C1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
FREM1Q5H8C1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 AC026396.1-201ENST00000419388 421 ntBASIC15.73■□□□□ 0.11
FREM1Q5H8C1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 MINOS1P3-201ENST00000457048 203 ntBASIC15.73■□□□□ 0.11
FREM1Q5H8C1 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 AL691432.3-201ENST00000621860 400 ntBASIC15.73■□□□□ 0.11
FREM1Q5H8C1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 AC104692.2-201ENST00000603054 253 ntBASIC15.73■□□□□ 0.11
FREM1Q5H8C1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 TP73-AS1-207ENST00000624167 988 ntBASIC15.73■□□□□ 0.11
FREM1Q5H8C1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FREM1Q5H8C1 INTS4P1-201ENST00000438455 1935 ntBASIC15.72■□□□□ 0.11
FREM1Q5H8C1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 AKR1C7P-201ENST00000305623 895 ntBASIC15.72■□□□□ 0.11
FREM1Q5H8C1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.72■□□□□ 0.11
FREM1Q5H8C1 AL031008.1-201ENST00000619963 541 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms