Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 AL158047.1-201ENST00000445918 881 ntBASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 SEC1P-202ENST00000473944 940 ntBASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 FITM1-202ENST00000559294 800 ntBASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RUNDC3AQ59EK9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RUNDC3AQ59EK9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RUNDC3AQ59EK9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RUNDC3AQ59EK9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RUNDC3AQ59EK9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
RUNDC3AQ59EK9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.96■□□□□ 0.3
RUNDC3AQ59EK9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 Z99916.2-201ENST00000604037 246 ntBASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 AC010653.2-201ENST00000623505 997 ntBASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 LINC00167-201ENST00000530583 1419 ntBASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.95■□□□□ 0.3
RUNDC3AQ59EK9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 HLA-J-201ENST00000462773 1622 ntBASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RUNDC3AQ59EK9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RUNDC3AQ59EK9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RUNDC3AQ59EK9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RUNDC3AQ59EK9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.93■□□□□ 0.3
RUNDC3AQ59EK9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RUNDC3AQ59EK9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms