Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 BX276092.7-203ENST00000637198 1536 ntBASIC21.42■■□□□ 1.02
PDS5AQ29RF7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 RPS2P1-201ENST00000434010 821 ntBASIC21.42■■□□□ 1.02
PDS5AQ29RF7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 AL671883.3-201ENST00000603274 991 ntBASIC21.42■■□□□ 1.02
PDS5AQ29RF7 AL022326.1-202ENST00000641533 845 ntBASIC21.42■■□□□ 1.02
PDS5AQ29RF7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDS5AQ29RF7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 LAGE3P1-201ENST00000425356 484 ntBASIC21.41■■□□□ 1.02
PDS5AQ29RF7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 OR7E14P-202ENST00000530490 1290 ntBASIC21.41■■□□□ 1.02
PDS5AQ29RF7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 AC008735.5-201ENST00000623544 497 ntBASIC21.41■■□□□ 1.02
PDS5AQ29RF7 AC073592.5-201ENST00000624854 528 ntBASIC21.41■■□□□ 1.02
PDS5AQ29RF7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.41■■□□□ 1.02
PDS5AQ29RF7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.41■■□□□ 1.02
PDS5AQ29RF7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 REXO1L9P-201ENST00000604264 2108 ntBASIC21.4■■□□□ 1.02
PDS5AQ29RF7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDS5AQ29RF7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDS5AQ29RF7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PDS5AQ29RF7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDS5AQ29RF7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDS5AQ29RF7 AC009949.1-201ENST00000623048 1830 ntBASIC21.39■■□□□ 1.01
PDS5AQ29RF7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PDS5AQ29RF7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PDS5AQ29RF7 IGHV3-22-201ENST00000520721 359 ntBASIC21.39■■□□□ 1.01
PDS5AQ29RF7 SLC25A1P1-201ENST00000528351 927 ntBASIC21.39■■□□□ 1.01
PDS5AQ29RF7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.39■■□□□ 1.01
PDS5AQ29RF7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.39■■□□□ 1.01
PDS5AQ29RF7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDS5AQ29RF7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDS5AQ29RF7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDS5AQ29RF7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDS5AQ29RF7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.39■■□□□ 1.01
PDS5AQ29RF7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.39■■□□□ 1.01
PDS5AQ29RF7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDS5AQ29RF7 AC132938.5-201ENST00000624980 1813 ntBASIC21.38■■□□□ 1.01
PDS5AQ29RF7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDS5AQ29RF7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms