Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PRAMEP78395 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEP78395 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEP78395 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEP78395 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEP78395 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEP78395 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEP78395 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PRAMEP78395 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
PRAMEP78395 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PRAMEP78395 SPDYE15P-201ENST00000424157 909 ntBASIC18.11■□□□□ 0.49
PRAMEP78395 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.11■□□□□ 0.49
PRAMEP78395 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.11■□□□□ 0.49
PRAMEP78395 AC024563.2-201ENST00000603282 481 ntBASIC18.11■□□□□ 0.49
PRAMEP78395 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.11■□□□□ 0.49
PRAMEP78395 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
PRAMEP78395 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEP78395 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEP78395 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.11■□□□□ 0.49
PRAMEP78395 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEP78395 AC134043.2-201ENST00000624206 2238 ntBASIC18.11■□□□□ 0.49
PRAMEP78395 AL391807.1-203ENST00000604392 2365 ntBASIC18.11■□□□□ 0.49
PRAMEP78395 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.11■□□□□ 0.49
PRAMEP78395 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEP78395 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEP78395 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
PRAMEP78395 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
PRAMEP78395 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.1■□□□□ 0.49
PRAMEP78395 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.1■□□□□ 0.49
PRAMEP78395 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PRAMEP78395 GNAS-203ENST00000306120 1878 ntBASIC18.1■□□□□ 0.49
PRAMEP78395 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.1■□□□□ 0.49
PRAMEP78395 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PRAMEP78395 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 FAM8A6P-201ENST00000407496 1135 ntBASIC18.1■□□□□ 0.49
PRAMEP78395 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.1■□□□□ 0.49
PRAMEP78395 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.1■□□□□ 0.49
PRAMEP78395 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
PRAMEP78395 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.1■□□□□ 0.49
PRAMEP78395 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.1■□□□□ 0.49
PRAMEP78395 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.1■□□□□ 0.49
PRAMEP78395 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.1■□□□□ 0.49
PRAMEP78395 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PRAMEP78395 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEP78395 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PRAMEP78395 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PRAMEP78395 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 AC132938.6-201ENST00000623828 1655 ntBASIC18.09■□□□□ 0.49
PRAMEP78395 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEP78395 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEP78395 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEP78395 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 RNF152P1-201ENST00000397754 604 ntBASIC18.09■□□□□ 0.49
PRAMEP78395 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 AK4P3-201ENST00000418260 669 ntBASIC18.09■□□□□ 0.49
PRAMEP78395 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.09■□□□□ 0.49
PRAMEP78395 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.09■□□□□ 0.49
PRAMEP78395 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.09■□□□□ 0.49
PRAMEP78395 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.09■□□□□ 0.49
PRAMEP78395 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 AC079602.3-201ENST00000623931 403 ntBASIC18.09■□□□□ 0.49
PRAMEP78395 LINC00602-201ENST00000629776 2065 ntBASIC18.09■□□□□ 0.49
PRAMEP78395 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PRAMEP78395 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.09■□□□□ 0.49
PRAMEP78395 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PRAMEP78395 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PRAMEP78395 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEP78395 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEP78395 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEP78395 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PRAMEP78395 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PRAMEP78395 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms