Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN6P56747 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN6P56747 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN6P56747 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN6P56747 AC211486.1-202ENST00000416371 468 ntBASIC17.18■□□□□ 0.34
CLDN6P56747 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN6P56747 AC211476.1-201ENST00000503899 468 ntBASIC17.18■□□□□ 0.34
CLDN6P56747 AC112698.1-201ENST00000510299 916 ntBASIC17.18■□□□□ 0.34
CLDN6P56747 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN6P56747 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN6P56747 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.18■□□□□ 0.34
CLDN6P56747 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.18■□□□□ 0.34
CLDN6P56747 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN6P56747 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN6P56747 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN6P56747 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN6P56747 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
CLDN6P56747 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN6P56747 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
CLDN6P56747 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN6P56747 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CLDN6P56747 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN6P56747 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN6P56747 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CLDN6P56747 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN6P56747 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN6P56747 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN6P56747 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLDN6P56747 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN6P56747 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN6P56747 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLDN6P56747 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN6P56747 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN6P56747 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN6P56747 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CLDN6P56747 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN6P56747 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN6P56747 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN6P56747 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.17■□□□□ 0.34
CLDN6P56747 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN6P56747 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN6P56747 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLDN6P56747 HTR5BP-201ENST00000430851 1154 ntBASIC17.17■□□□□ 0.34
CLDN6P56747 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN6P56747 ALG1L5P-201ENST00000482043 771 ntBASIC17.17■□□□□ 0.34
CLDN6P56747 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN6P56747 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.17■□□□□ 0.34
CLDN6P56747 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN6P56747 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
CLDN6P56747 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLDN6P56747 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.17■□□□□ 0.34
CLDN6P56747 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.17■□□□□ 0.34
CLDN6P56747 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.17■□□□□ 0.34
CLDN6P56747 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN6P56747 AP000867.4-201ENST00000641616 219 ntBASIC17.17■□□□□ 0.34
CLDN6P56747 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN6P56747 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CLDN6P56747 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN6P56747 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN6P56747 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN6P56747 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN6P56747 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN6P56747 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN6P56747 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN6P56747 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN6P56747 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLDN6P56747 LAGE3P1-201ENST00000425356 484 ntBASIC17.16■□□□□ 0.34
CLDN6P56747 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN6P56747 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.16■□□□□ 0.34
CLDN6P56747 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN6P56747 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN6P56747 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN6P56747 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN6P56747 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN6P56747 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN6P56747 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
CLDN6P56747 AC097374.2-201ENST00000618617 1306 ntBASIC17.16■□□□□ 0.34
CLDN6P56747 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN6P56747 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN6P56747 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN6P56747 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN6P56747 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 AP000974.1-201ENST00000623909 2387 ntBASIC17.15■□□□□ 0.34
CLDN6P56747 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN6P56747 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CLDN6P56747 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CLDN6P56747 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLDN6P56747 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 KRT18P65-201ENST00000439811 1286 ntBASIC17.15■□□□□ 0.34
CLDN6P56747 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CLDN6P56747 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN6P56747 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms