Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.97■□□□□ 0.63
LHX1P48742 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LHX1P48742 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.97■□□□□ 0.63
LHX1P48742 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.97■□□□□ 0.63
LHX1P48742 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.97■□□□□ 0.63
LHX1P48742 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.97■□□□□ 0.63
LHX1P48742 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.97■□□□□ 0.63
LHX1P48742 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.97■□□□□ 0.63
LHX1P48742 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
LHX1P48742 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 AP000997.3-201ENST00000623333 2250 ntBASIC18.97■□□□□ 0.63
LHX1P48742 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX1P48742 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.96■□□□□ 0.63
LHX1P48742 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LHX1P48742 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX1P48742 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LHX1P48742 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX1P48742 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX1P48742 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LHX1P48742 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.96■□□□□ 0.63
LHX1P48742 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX1P48742 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.96■□□□□ 0.63
LHX1P48742 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LHX1P48742 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.96■□□□□ 0.63
LHX1P48742 AC132008.2-207ENST00000454517 770 ntBASIC18.96■□□□□ 0.63
LHX1P48742 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LHX1P48742 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.96■□□□□ 0.63
LHX1P48742 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.96■□□□□ 0.63
LHX1P48742 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LHX1P48742 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX1P48742 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.96■□□□□ 0.63
LHX1P48742 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LHX1P48742 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX1P48742 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.96■□□□□ 0.63
LHX1P48742 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.96■□□□□ 0.63
LHX1P48742 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LHX1P48742 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LHX1P48742 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX1P48742 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.95■□□□□ 0.62
LHX1P48742 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LHX1P48742 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX1P48742 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.95■□□□□ 0.62
LHX1P48742 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.95■□□□□ 0.62
LHX1P48742 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LHX1P48742 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX1P48742 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LHX1P48742 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.95■□□□□ 0.62
LHX1P48742 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX1P48742 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX1P48742 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX1P48742 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LHX1P48742 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.95■□□□□ 0.62
LHX1P48742 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.95■□□□□ 0.62
LHX1P48742 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.95■□□□□ 0.62
LHX1P48742 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.95■□□□□ 0.62
LHX1P48742 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
LHX1P48742 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.95■□□□□ 0.62
LHX1P48742 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LHX1P48742 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LHX1P48742 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.95■□□□□ 0.62
LHX1P48742 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.95■□□□□ 0.62
LHX1P48742 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX1P48742 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.95■□□□□ 0.62
LHX1P48742 AC138028.4-201ENST00000564984 1845 ntBASIC18.95■□□□□ 0.62
LHX1P48742 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX1P48742 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX1P48742 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LHX1P48742 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.95■□□□□ 0.62
LHX1P48742 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.95■□□□□ 0.62
LHX1P48742 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX1P48742 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.95■□□□□ 0.62
LHX1P48742 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX1P48742 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX1P48742 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.94■□□□□ 0.62
LHX1P48742 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX1P48742 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.94■□□□□ 0.62
LHX1P48742 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LHX1P48742 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX1P48742 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.94■□□□□ 0.62
LHX1P48742 AKR1C7P-201ENST00000305623 895 ntBASIC18.94■□□□□ 0.62
LHX1P48742 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX1P48742 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX1P48742 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.94■□□□□ 0.62
LHX1P48742 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LHX1P48742 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX1P48742 AC122714.2-201ENST00000502787 707 ntBASIC18.94■□□□□ 0.62
LHX1P48742 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.94■□□□□ 0.62
LHX1P48742 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
LHX1P48742 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX1P48742 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.94■□□□□ 0.62
LHX1P48742 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX1P48742 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX1P48742 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX1P48742 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms