Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 KRT8P11-201ENST00000409686 1436 ntBASIC13.22□□□□□ -0.29
CKS2P33552 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CKS2P33552 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.22□□□□□ -0.29
CKS2P33552 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CKS2P33552 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.22□□□□□ -0.29
CKS2P33552 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.22□□□□□ -0.29
CKS2P33552 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CKS2P33552 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.22□□□□□ -0.29
CKS2P33552 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.22□□□□□ -0.29
CKS2P33552 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CKS2P33552 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CKS2P33552 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CKS2P33552 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CKS2P33552 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CKS2P33552 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CKS2P33552 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.22□□□□□ -0.29
CKS2P33552 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 C1QL1P1-201ENST00000568105 661 ntBASIC13.22□□□□□ -0.29
CKS2P33552 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.22□□□□□ -0.29
CKS2P33552 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.22□□□□□ -0.29
CKS2P33552 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.22□□□□□ -0.29
CKS2P33552 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.22□□□□□ -0.29
CKS2P33552 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 CROCCP2-202ENST00000412962 2773 ntBASIC13.22□□□□□ -0.29
CKS2P33552 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CKS2P33552 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CKS2P33552 MIR600HG-201ENST00000449175 5984 ntBASIC13.22□□□□□ -0.29
CKS2P33552 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.22□□□□□ -0.29
CKS2P33552 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 NORAD-201ENST00000565493 5339 ntBASIC13.22□□□□□ -0.29
CKS2P33552 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.22□□□□□ -0.29
CKS2P33552 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.22□□□□□ -0.29
CKS2P33552 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.22□□□□□ -0.29
CKS2P33552 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS2P33552 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS2P33552 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.21□□□□□ -0.29
CKS2P33552 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS2P33552 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS2P33552 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.21□□□□□ -0.29
CKS2P33552 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CKS2P33552 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS2P33552 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS2P33552 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS2P33552 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.21□□□□□ -0.29
CKS2P33552 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS2P33552 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.21□□□□□ -0.29
CKS2P33552 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CKS2P33552 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS2P33552 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.21□□□□□ -0.29
CKS2P33552 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
CKS2P33552 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS2P33552 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CKS2P33552 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.21□□□□□ -0.29
CKS2P33552 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS2P33552 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.21□□□□□ -0.29
CKS2P33552 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CKS2P33552 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.21□□□□□ -0.29
CKS2P33552 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.21□□□□□ -0.29
CKS2P33552 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS2P33552 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.21□□□□□ -0.29
CKS2P33552 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CKS2P33552 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.21□□□□□ -0.29
CKS2P33552 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.21□□□□□ -0.29
CKS2P33552 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.21□□□□□ -0.29
CKS2P33552 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.21□□□□□ -0.29
CKS2P33552 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CKS2P33552 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
CKS2P33552 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.21□□□□□ -0.29
CKS2P33552 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS2P33552 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.21□□□□□ -0.29
CKS2P33552 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.21□□□□□ -0.29
CKS2P33552 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.21□□□□□ -0.29
CKS2P33552 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.21□□□□□ -0.29
CKS2P33552 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS2P33552 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS2P33552 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CKS2P33552 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.3
CKS2P33552 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
CKS2P33552 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CKS2P33552 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms