Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RXRBP28702 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
RXRBP28702 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
RXRBP28702 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RXRBP28702 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RXRBP28702 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RXRBP28702 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
RXRBP28702 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
RXRBP28702 AL133338.1-201ENST00000565695 1517 ntBASIC23.3■■□□□ 1.32
RXRBP28702 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RXRBP28702 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RXRBP28702 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RXRBP28702 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
RXRBP28702 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RXRBP28702 FALEC-201ENST00000416894 566 ntTSL 3 BASIC23.3■■□□□ 1.32
RXRBP28702 FAM185BP-201ENST00000443595 716 ntBASIC23.3■■□□□ 1.32
RXRBP28702 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC23.3■■□□□ 1.32
RXRBP28702 AL513480.1-201ENST00000451731 511 ntBASIC23.3■■□□□ 1.32
RXRBP28702 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC23.3■■□□□ 1.32
RXRBP28702 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RXRBP28702 AC243562.1-201ENST00000560672 389 ntBASIC23.3■■□□□ 1.32
RXRBP28702 AC026150.2-201ENST00000564693 1156 ntBASIC23.3■■□□□ 1.32
RXRBP28702 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RXRBP28702 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC23.3■■□□□ 1.32
RXRBP28702 MIR6805-201ENST00000615055 62 ntBASIC23.3■■□□□ 1.32
RXRBP28702 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RXRBP28702 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RXRBP28702 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.3■■□□□ 1.32
RXRBP28702 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.3■■□□□ 1.32
RXRBP28702 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RXRBP28702 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RXRBP28702 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC23.29■■□□□ 1.32
RXRBP28702 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RXRBP28702 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.29■■□□□ 1.32
RXRBP28702 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RXRBP28702 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RXRBP28702 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RXRBP28702 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RXRBP28702 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RXRBP28702 GIMAP3P-201ENST00000495150 836 ntBASIC23.29■■□□□ 1.32
RXRBP28702 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC23.29■■□□□ 1.32
RXRBP28702 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.29■■□□□ 1.32
RXRBP28702 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC23.29■■□□□ 1.32
RXRBP28702 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RXRBP28702 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.29■■□□□ 1.32
RXRBP28702 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
RXRBP28702 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RXRBP28702 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
RXRBP28702 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
RXRBP28702 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC23.28■■□□□ 1.32
RXRBP28702 AC092580.3-201ENST00000430932 139 ntBASIC23.28■■□□□ 1.32
RXRBP28702 AC241585.1-201ENST00000433527 519 ntBASIC23.28■■□□□ 1.32
RXRBP28702 HLA-DPB2-205ENST00000435074 1188 ntBASIC23.28■■□□□ 1.32
RXRBP28702 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC23.28■■□□□ 1.32
RXRBP28702 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RXRBP28702 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC23.28■■□□□ 1.32
RXRBP28702 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC23.28■■□□□ 1.32
RXRBP28702 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC23.28■■□□□ 1.32
RXRBP28702 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RXRBP28702 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RXRBP28702 GPER1-207ENST00000619052 571 ntTSL 2 BASIC23.28■■□□□ 1.32
RXRBP28702 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC23.28■■□□□ 1.32
RXRBP28702 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
RXRBP28702 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.28■■□□□ 1.32
RXRBP28702 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RXRBP28702 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
RXRBP28702 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RXRBP28702 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RXRBP28702 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RXRBP28702 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RXRBP28702 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC23.27■■□□□ 1.32
RXRBP28702 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RXRBP28702 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RXRBP28702 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RXRBP28702 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC23.27■■□□□ 1.32
RXRBP28702 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
RXRBP28702 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.27■■□□□ 1.32
RXRBP28702 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RXRBP28702 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RXRBP28702 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.27■■□□□ 1.32
RXRBP28702 EP400NL-214ENST00000641289 2402 ntBASIC23.27■■□□□ 1.32
RXRBP28702 ACA64.2-201ENST00000459014 129 ntBASIC23.27■■□□□ 1.32
RXRBP28702 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
RXRBP28702 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RXRBP28702 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC23.27■■□□□ 1.32
RXRBP28702 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC23.27■■□□□ 1.32
RXRBP28702 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RXRBP28702 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC23.27■■□□□ 1.32
RXRBP28702 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RXRBP28702 TMED1-207ENST00000591695 809 ntTSL 5 BASIC23.27■■□□□ 1.32
RXRBP28702 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RXRBP28702 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RXRBP28702 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC23.27■■□□□ 1.32
RXRBP28702 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
RXRBP28702 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RXRBP28702 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RXRBP28702 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RXRBP28702 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RXRBP28702 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RXRBP28702 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms