Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.71■□□□□ 0.27
NR4A1P22736 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NR4A1P22736 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NR4A1P22736 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.71■□□□□ 0.27
NR4A1P22736 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NR4A1P22736 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.71■□□□□ 0.27
NR4A1P22736 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.71■□□□□ 0.27
NR4A1P22736 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.71■□□□□ 0.27
NR4A1P22736 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.71■□□□□ 0.27
NR4A1P22736 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NR4A1P22736 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.71■□□□□ 0.27
NR4A1P22736 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NR4A1P22736 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NR4A1P22736 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NR4A1P22736 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
NR4A1P22736 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NR4A1P22736 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.7■□□□□ 0.26
NR4A1P22736 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NR4A1P22736 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.7■□□□□ 0.26
NR4A1P22736 OR6D1P-203ENST00000641209 4860 ntBASIC16.7■□□□□ 0.26
NR4A1P22736 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
NR4A1P22736 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.7■□□□□ 0.26
NR4A1P22736 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
NR4A1P22736 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.7■□□□□ 0.26
NR4A1P22736 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NR4A1P22736 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.7■□□□□ 0.26
NR4A1P22736 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.7■□□□□ 0.26
NR4A1P22736 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.7■□□□□ 0.26
NR4A1P22736 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.7■□□□□ 0.26
NR4A1P22736 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.7■□□□□ 0.26
NR4A1P22736 AL160286.2-201ENST00000567150 934 ntBASIC16.7■□□□□ 0.26
NR4A1P22736 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.7■□□□□ 0.26
NR4A1P22736 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.7■□□□□ 0.26
NR4A1P22736 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NR4A1P22736 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NR4A1P22736 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.7■□□□□ 0.26
NR4A1P22736 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.7■□□□□ 0.26
NR4A1P22736 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.7■□□□□ 0.26
NR4A1P22736 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR4A1P22736 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NR4A1P22736 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR4A1P22736 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.69■□□□□ 0.26
NR4A1P22736 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR4A1P22736 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.69■□□□□ 0.26
NR4A1P22736 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR4A1P22736 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
NR4A1P22736 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR4A1P22736 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.69■□□□□ 0.26
NR4A1P22736 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR4A1P22736 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR4A1P22736 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR4A1P22736 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.69■□□□□ 0.26
NR4A1P22736 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.69■□□□□ 0.26
NR4A1P22736 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.69■□□□□ 0.26
NR4A1P22736 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NR4A1P22736 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR4A1P22736 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.69■□□□□ 0.26
NR4A1P22736 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.69■□□□□ 0.26
NR4A1P22736 AL355075.4-201ENST00000554988 638 ntBASIC16.69■□□□□ 0.26
NR4A1P22736 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.69■□□□□ 0.26
NR4A1P22736 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.69■□□□□ 0.26
NR4A1P22736 REXO1L10P-201ENST00000615707 1290 ntBASIC16.69■□□□□ 0.26
NR4A1P22736 REXO1L12P-201ENST00000622156 912 ntBASIC16.69■□□□□ 0.26
NR4A1P22736 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.69■□□□□ 0.26
NR4A1P22736 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.69■□□□□ 0.26
NR4A1P22736 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NR4A1P22736 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.69■□□□□ 0.26
NR4A1P22736 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR4A1P22736 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR4A1P22736 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR4A1P22736 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NR4A1P22736 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR4A1P22736 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NR4A1P22736 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NR4A1P22736 HEIH-201ENST00000623091 1652 ntBASIC16.69■□□□□ 0.26
NR4A1P22736 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.69■□□□□ 0.26
NR4A1P22736 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR4A1P22736 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NR4A1P22736 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR4A1P22736 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.68■□□□□ 0.26
NR4A1P22736 FSCN1P1-201ENST00000568912 1481 ntBASIC16.68■□□□□ 0.26
NR4A1P22736 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms