Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.54■□□□□ 0.72
RFX1P22670 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.54■□□□□ 0.72
RFX1P22670 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFX1P22670 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.54■□□□□ 0.72
RFX1P22670 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.54■□□□□ 0.72
RFX1P22670 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFX1P22670 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RFX1P22670 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFX1P22670 LETM1P2-201ENST00000597330 2178 ntBASIC19.54■□□□□ 0.72
RFX1P22670 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFX1P22670 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFX1P22670 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFX1P22670 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RFX1P22670 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RFX1P22670 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFX1P22670 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.54■□□□□ 0.72
RFX1P22670 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFX1P22670 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.54■□□□□ 0.72
RFX1P22670 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RFX1P22670 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX1P22670 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX1P22670 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.53■□□□□ 0.72
RFX1P22670 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
RFX1P22670 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX1P22670 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX1P22670 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RFX1P22670 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX1P22670 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.53■□□□□ 0.72
RFX1P22670 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX1P22670 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX1P22670 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RFX1P22670 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
RFX1P22670 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX1P22670 HBZP1-201ENST00000354915 429 ntBASIC19.53■□□□□ 0.72
RFX1P22670 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX1P22670 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.53■□□□□ 0.72
RFX1P22670 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.53■□□□□ 0.72
RFX1P22670 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
RFX1P22670 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.53■□□□□ 0.72
RFX1P22670 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.53■□□□□ 0.72
RFX1P22670 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RFX1P22670 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFX1P22670 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX1P22670 AC134043.2-201ENST00000624206 2238 ntBASIC19.53■□□□□ 0.72
RFX1P22670 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.53■□□□□ 0.72
RFX1P22670 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
RFX1P22670 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX1P22670 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFX1P22670 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX1P22670 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFX1P22670 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RFX1P22670 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.53■□□□□ 0.72
RFX1P22670 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX1P22670 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.53■□□□□ 0.72
RFX1P22670 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFX1P22670 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFX1P22670 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFX1P22670 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFX1P22670 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFX1P22670 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFX1P22670 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFX1P22670 AL022342.1-201ENST00000400363 863 ntBASIC19.52■□□□□ 0.72
RFX1P22670 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.52■□□□□ 0.72
RFX1P22670 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.52■□□□□ 0.72
RFX1P22670 AC113404.2-201ENST00000507884 177 ntBASIC19.52■□□□□ 0.72
RFX1P22670 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.52■□□□□ 0.72
RFX1P22670 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.52■□□□□ 0.72
RFX1P22670 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFX1P22670 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.52■□□□□ 0.72
RFX1P22670 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RFX1P22670 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.52■□□□□ 0.72
RFX1P22670 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RFX1P22670 AC011498.5-201ENST00000592027 486 ntBASIC19.52■□□□□ 0.72
RFX1P22670 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.52■□□□□ 0.72
RFX1P22670 AC023511.2-201ENST00000618803 211 ntBASIC19.52■□□□□ 0.72
RFX1P22670 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFX1P22670 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RFX1P22670 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFX1P22670 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFX1P22670 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RFX1P22670 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFX1P22670 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
RFX1P22670 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
RFX1P22670 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RFX1P22670 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RFX1P22670 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RFX1P22670 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
RFX1P22670 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RFX1P22670 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
RFX1P22670 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
RFX1P22670 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.52■□□□□ 0.71
RFX1P22670 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFX1P22670 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX1P22670 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX1P22670 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.51■□□□□ 0.71
RFX1P22670 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RFX1P22670 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RFX1P22670 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX1P22670 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX1P22670 AC067852.2-201ENST00000590513 2313 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms