Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.78■■□□□ 1.08
COL11A2P13942 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.78■■□□□ 1.08
COL11A2P13942 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A2P13942 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A2P13942 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A2P13942 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.78■■□□□ 1.08
COL11A2P13942 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A2P13942 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A2P13942 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A2P13942 AC004461.1-201ENST00000412461 403 ntBASIC21.77■■□□□ 1.08
COL11A2P13942 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.77■■□□□ 1.08
COL11A2P13942 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.77■■□□□ 1.08
COL11A2P13942 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.77■■□□□ 1.08
COL11A2P13942 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.77■■□□□ 1.08
COL11A2P13942 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A2P13942 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC21.77■■□□□ 1.08
COL11A2P13942 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A2P13942 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.77■■□□□ 1.08
COL11A2P13942 AC092364.2-202ENST00000597012 1073 ntBASIC21.77■■□□□ 1.08
COL11A2P13942 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A2P13942 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.77■■□□□ 1.08
COL11A2P13942 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A2P13942 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
COL11A2P13942 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A2P13942 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A2P13942 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.77■■□□□ 1.08
COL11A2P13942 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
COL11A2P13942 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
COL11A2P13942 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.77■■□□□ 1.08
COL11A2P13942 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL11A2P13942 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.77■■□□□ 1.08
COL11A2P13942 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.77■■□□□ 1.08
COL11A2P13942 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.77■■□□□ 1.08
COL11A2P13942 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.77■■□□□ 1.08
COL11A2P13942 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
COL11A2P13942 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.76■■□□□ 1.07
COL11A2P13942 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL11A2P13942 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL11A2P13942 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.76■■□□□ 1.07
COL11A2P13942 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL11A2P13942 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL11A2P13942 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.76■■□□□ 1.07
COL11A2P13942 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL11A2P13942 AP002414.1-201ENST00000391405 1147 ntBASIC21.76■■□□□ 1.07
COL11A2P13942 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL11A2P13942 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.76■■□□□ 1.07
COL11A2P13942 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.76■■□□□ 1.07
COL11A2P13942 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.76■■□□□ 1.07
COL11A2P13942 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.76■■□□□ 1.07
COL11A2P13942 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL11A2P13942 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL11A2P13942 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL11A2P13942 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.76■■□□□ 1.07
COL11A2P13942 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL11A2P13942 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.75■■□□□ 1.07
COL11A2P13942 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL11A2P13942 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.75■■□□□ 1.07
COL11A2P13942 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL11A2P13942 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL11A2P13942 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
COL11A2P13942 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
COL11A2P13942 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.75■■□□□ 1.07
COL11A2P13942 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL11A2P13942 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.75■■□□□ 1.07
COL11A2P13942 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL11A2P13942 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL11A2P13942 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.75■■□□□ 1.07
COL11A2P13942 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL11A2P13942 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.75■■□□□ 1.07
COL11A2P13942 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.75■■□□□ 1.07
COL11A2P13942 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
COL11A2P13942 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.75■■□□□ 1.07
COL11A2P13942 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.75■■□□□ 1.07
COL11A2P13942 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.75■■□□□ 1.07
COL11A2P13942 AC109462.3-201ENST00000573934 613 ntBASIC21.75■■□□□ 1.07
COL11A2P13942 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.74■■□□□ 1.07
COL11A2P13942 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
COL11A2P13942 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
COL11A2P13942 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL11A2P13942 AC018445.3-201ENST00000624177 1945 ntBASIC21.74■■□□□ 1.07
COL11A2P13942 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.74■■□□□ 1.07
COL11A2P13942 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
COL11A2P13942 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL11A2P13942 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL11A2P13942 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL11A2P13942 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL11A2P13942 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.74■■□□□ 1.07
COL11A2P13942 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
COL11A2P13942 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.74■■□□□ 1.07
COL11A2P13942 AC009093.7-201ENST00000623853 1223 ntBASIC21.74■■□□□ 1.07
COL11A2P13942 AC092919.2-201ENST00000623631 1645 ntBASIC21.74■■□□□ 1.07
COL11A2P13942 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL11A2P13942 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
COL11A2P13942 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
COL11A2P13942 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL11A2P13942 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL11A2P13942 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
COL11A2P13942 AC009336.1-201ENST00000608941 1553 ntBASIC21.73■■□□□ 1.07
COL11A2P13942 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL11A2P13942 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms