Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.93■□□□□ 0.46
PDGFBP01127 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.93■□□□□ 0.46
PDGFBP01127 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFBP01127 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFBP01127 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.93■□□□□ 0.46
PDGFBP01127 SIRPAP1-201ENST00000448467 1770 ntBASIC17.93■□□□□ 0.46
PDGFBP01127 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFBP01127 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PDGFBP01127 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFBP01127 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PDGFBP01127 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.93■□□□□ 0.46
PDGFBP01127 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.93■□□□□ 0.46
PDGFBP01127 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
PDGFBP01127 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFBP01127 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFBP01127 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.92■□□□□ 0.46
PDGFBP01127 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFBP01127 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
PDGFBP01127 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.92■□□□□ 0.46
PDGFBP01127 AC096633.1-201ENST00000422446 749 ntBASIC17.92■□□□□ 0.46
PDGFBP01127 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.92■□□□□ 0.46
PDGFBP01127 GAPDHP21-201ENST00000450301 1010 ntBASIC17.92■□□□□ 0.46
PDGFBP01127 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.92■□□□□ 0.46
PDGFBP01127 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.92■□□□□ 0.46
PDGFBP01127 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PDGFBP01127 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.92■□□□□ 0.46
PDGFBP01127 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFBP01127 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFBP01127 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFBP01127 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.92■□□□□ 0.46
PDGFBP01127 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDGFBP01127 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.92■□□□□ 0.46
PDGFBP01127 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.92■□□□□ 0.46
PDGFBP01127 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.91■□□□□ 0.46
PDGFBP01127 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.91■□□□□ 0.46
PDGFBP01127 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.91■□□□□ 0.46
PDGFBP01127 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PDGFBP01127 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
PDGFBP01127 UGT1A2P-201ENST00000454886 866 ntBASIC17.91■□□□□ 0.46
PDGFBP01127 SIGLEC30P-201ENST00000455569 941 ntBASIC17.91■□□□□ 0.46
PDGFBP01127 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.91■□□□□ 0.46
PDGFBP01127 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.91■□□□□ 0.46
PDGFBP01127 AC023141.13-201ENST00000604991 943 ntBASIC17.91■□□□□ 0.46
PDGFBP01127 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PDGFBP01127 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
PDGFBP01127 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PDGFBP01127 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.91■□□□□ 0.46
PDGFBP01127 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 AC005082.1-201ENST00000413042 2259 ntBASIC17.91■□□□□ 0.46
PDGFBP01127 AC132938.5-201ENST00000624980 1813 ntBASIC17.91■□□□□ 0.46
PDGFBP01127 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.91■□□□□ 0.46
PDGFBP01127 AL158211.5-201ENST00000623583 2518 ntBASIC17.91■□□□□ 0.46
PDGFBP01127 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDGFBP01127 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
PDGFBP01127 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFBP01127 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFBP01127 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFBP01127 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFBP01127 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFBP01127 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.9■□□□□ 0.46
PDGFBP01127 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFBP01127 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.9■□□□□ 0.46
PDGFBP01127 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFBP01127 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFBP01127 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFBP01127 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFBP01127 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFBP01127 TSPY16P-201ENST00000449843 468 ntBASIC17.9■□□□□ 0.46
PDGFBP01127 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.9■□□□□ 0.46
PDGFBP01127 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.9■□□□□ 0.46
PDGFBP01127 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.9■□□□□ 0.46
PDGFBP01127 REXO1L3P-201ENST00000622202 1288 ntBASIC17.9■□□□□ 0.46
PDGFBP01127 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFBP01127 AL805961.1-202ENST00000641562 540 ntBASIC17.9■□□□□ 0.46
PDGFBP01127 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PDGFBP01127 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.9■□□□□ 0.46
PDGFBP01127 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
PDGFBP01127 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFBP01127 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PDGFBP01127 AL121761.2-201ENST00000598007 1648 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms