Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TIMP1P01033 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.29■□□□□ 0.68
TIMP1P01033 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.29■□□□□ 0.68
TIMP1P01033 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TIMP1P01033 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TIMP1P01033 AC025580.3-201ENST00000617932 1424 ntBASIC19.29■□□□□ 0.68
TIMP1P01033 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TIMP1P01033 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.29■□□□□ 0.68
TIMP1P01033 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TIMP1P01033 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.29■□□□□ 0.68
TIMP1P01033 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TIMP1P01033 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TIMP1P01033 HLA-J-203ENST00000494367 1087 ntBASIC19.29■□□□□ 0.68
TIMP1P01033 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.29■□□□□ 0.68
TIMP1P01033 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TIMP1P01033 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.29■□□□□ 0.68
TIMP1P01033 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.29■□□□□ 0.68
TIMP1P01033 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TIMP1P01033 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TIMP1P01033 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TIMP1P01033 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TIMP1P01033 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TIMP1P01033 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TIMP1P01033 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TIMP1P01033 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TIMP1P01033 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TIMP1P01033 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TIMP1P01033 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.28■□□□□ 0.68
TIMP1P01033 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TIMP1P01033 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TIMP1P01033 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TIMP1P01033 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.28■□□□□ 0.68
TIMP1P01033 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TIMP1P01033 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TIMP1P01033 KLF4P1-201ENST00000412782 1185 ntBASIC19.28■□□□□ 0.68
TIMP1P01033 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.28■□□□□ 0.68
TIMP1P01033 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TIMP1P01033 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.28■□□□□ 0.68
TIMP1P01033 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.28■□□□□ 0.68
TIMP1P01033 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.28■□□□□ 0.68
TIMP1P01033 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.28■□□□□ 0.68
TIMP1P01033 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TIMP1P01033 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.28■□□□□ 0.68
TIMP1P01033 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TIMP1P01033 AC091812.2-201ENST00000619081 385 ntBASIC19.28■□□□□ 0.68
TIMP1P01033 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.28■□□□□ 0.68
TIMP1P01033 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TIMP1P01033 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.28■□□□□ 0.68
TIMP1P01033 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TIMP1P01033 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TIMP1P01033 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TIMP1P01033 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMP1P01033 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TIMP1P01033 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMP1P01033 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TIMP1P01033 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMP1P01033 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMP1P01033 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TIMP1P01033 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TIMP1P01033 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TIMP1P01033 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TIMP1P01033 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TIMP1P01033 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMP1P01033 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMP1P01033 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TIMP1P01033 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TIMP1P01033 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.27■□□□□ 0.68
TIMP1P01033 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TIMP1P01033 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.27■□□□□ 0.68
TIMP1P01033 PAWRP1-201ENST00000451083 565 ntBASIC19.27■□□□□ 0.68
TIMP1P01033 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TIMP1P01033 AC025678.2-201ENST00000562061 970 ntBASIC19.27■□□□□ 0.68
TIMP1P01033 OR7E47P-204ENST00000575924 449 ntBASIC19.27■□□□□ 0.68
TIMP1P01033 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.27■□□□□ 0.68
TIMP1P01033 AC138761.1-201ENST00000584393 385 ntBASIC19.27■□□□□ 0.68
TIMP1P01033 GGTLC5P-201ENST00000617623 998 ntBASIC19.27■□□□□ 0.68
TIMP1P01033 AC105339.1-204ENST00000636249 355 ntBASIC19.27■□□□□ 0.68
TIMP1P01033 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.27■□□□□ 0.68
TIMP1P01033 AC007064.4-201ENST00000637740 555 ntBASIC19.27■□□□□ 0.68
TIMP1P01033 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.27■□□□□ 0.68
TIMP1P01033 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.27■□□□□ 0.68
TIMP1P01033 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMP1P01033 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
TIMP1P01033 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TIMP1P01033 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TIMP1P01033 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TIMP1P01033 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.27■□□□□ 0.67
TIMP1P01033 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
TIMP1P01033 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
TIMP1P01033 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TIMP1P01033 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.26■□□□□ 0.67
TIMP1P01033 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TIMP1P01033 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TIMP1P01033 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TIMP1P01033 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMP1P01033 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMP1P01033 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMP1P01033 AC003669.1-201ENST00000334569 611 ntBASIC19.26■□□□□ 0.67
TIMP1P01033 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TIMP1P01033 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms