Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CLPTM1O96005 AL121906.2-201ENST00000621597 723 ntBASIC16.98■□□□□ 0.31
CLPTM1O96005 AL359736.2-201ENST00000621992 437 ntBASIC16.98■□□□□ 0.31
CLPTM1O96005 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CLPTM1O96005 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLPTM1O96005 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLPTM1O96005 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CLPTM1O96005 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLPTM1O96005 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLPTM1O96005 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CLPTM1O96005 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CLPTM1O96005 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLPTM1O96005 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.98■□□□□ 0.31
CLPTM1O96005 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.98■□□□□ 0.31
CLPTM1O96005 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLPTM1O96005 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLPTM1O96005 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLPTM1O96005 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.97■□□□□ 0.31
CLPTM1O96005 AC008556.1-201ENST00000610908 2040 ntBASIC16.97■□□□□ 0.31
CLPTM1O96005 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLPTM1O96005 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLPTM1O96005 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CLPTM1O96005 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CLPTM1O96005 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CLPTM1O96005 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLPTM1O96005 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLPTM1O96005 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.97■□□□□ 0.31
CLPTM1O96005 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLPTM1O96005 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLPTM1O96005 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLPTM1O96005 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLPTM1O96005 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CLPTM1O96005 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.97■□□□□ 0.31
CLPTM1O96005 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.97■□□□□ 0.31
CLPTM1O96005 PRKY-204ENST00000533551 1019 ntBASIC16.97■□□□□ 0.31
CLPTM1O96005 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CLPTM1O96005 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CLPTM1O96005 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLPTM1O96005 FAM197Y4-202ENST00000622692 608 ntBASIC16.97■□□□□ 0.31
CLPTM1O96005 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLPTM1O96005 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CLPTM1O96005 LINC00554-201ENST00000564841 3011 ntBASIC16.97■□□□□ 0.31
CLPTM1O96005 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.97■□□□□ 0.31
CLPTM1O96005 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLPTM1O96005 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.97■□□□□ 0.31
CLPTM1O96005 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.97■□□□□ 0.31
CLPTM1O96005 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.97■□□□□ 0.31
CLPTM1O96005 AC106886.4-201ENST00000623557 2502 ntBASIC16.97■□□□□ 0.31
CLPTM1O96005 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLPTM1O96005 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLPTM1O96005 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CLPTM1O96005 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 AC112777.1-201ENST00000540175 1423 ntBASIC16.96■□□□□ 0.31
CLPTM1O96005 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 MTMR9LP-203ENST00000426597 1545 ntBASIC16.96■□□□□ 0.31
CLPTM1O96005 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.96■□□□□ 0.31
CLPTM1O96005 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CLPTM1O96005 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.96■□□□□ 0.31
CLPTM1O96005 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.96■□□□□ 0.31
CLPTM1O96005 KRASP1-201ENST00000407852 552 ntBASIC16.96■□□□□ 0.31
CLPTM1O96005 AC239809.2-201ENST00000415381 517 ntBASIC16.96■□□□□ 0.31
CLPTM1O96005 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.96■□□□□ 0.31
CLPTM1O96005 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.96■□□□□ 0.31
CLPTM1O96005 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CLPTM1O96005 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.96■□□□□ 0.31
CLPTM1O96005 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.96■□□□□ 0.31
CLPTM1O96005 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.96■□□□□ 0.31
CLPTM1O96005 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.96■□□□□ 0.31
CLPTM1O96005 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLPTM1O96005 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CLPTM1O96005 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
CLPTM1O96005 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLPTM1O96005 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.96■□□□□ 0.3
CLPTM1O96005 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLPTM1O96005 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
CLPTM1O96005 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLPTM1O96005 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CLPTM1O96005 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.95■□□□□ 0.3
CLPTM1O96005 CROCCP2-202ENST00000412962 2773 ntBASIC16.95■□□□□ 0.3
CLPTM1O96005 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLPTM1O96005 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLPTM1O96005 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.95■□□□□ 0.3
CLPTM1O96005 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLPTM1O96005 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CLPTM1O96005 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLPTM1O96005 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms