Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
USP1O94782 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
USP1O94782 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.18■□□□□ 0.5
USP1O94782 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.18■□□□□ 0.5
USP1O94782 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
USP1O94782 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.18■□□□□ 0.5
USP1O94782 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
USP1O94782 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
USP1O94782 AC012306.2-201ENST00000609350 630 ntBASIC18.18■□□□□ 0.5
USP1O94782 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
USP1O94782 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
USP1O94782 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
USP1O94782 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
USP1O94782 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP1O94782 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
USP1O94782 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
USP1O94782 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP1O94782 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.17■□□□□ 0.5
USP1O94782 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP1O94782 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
USP1O94782 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
USP1O94782 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
USP1O94782 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.17■□□□□ 0.5
USP1O94782 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
USP1O94782 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP1O94782 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
USP1O94782 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
USP1O94782 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.17■□□□□ 0.5
USP1O94782 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.17■□□□□ 0.5
USP1O94782 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
USP1O94782 AC145285.6-201ENST00000604632 637 ntBASIC18.17■□□□□ 0.5
USP1O94782 AL157888.1-201ENST00000631930 593 ntBASIC18.17■□□□□ 0.5
USP1O94782 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
USP1O94782 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP1O94782 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP1O94782 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP1O94782 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP1O94782 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP1O94782 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP1O94782 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP1O94782 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP1O94782 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
USP1O94782 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP1O94782 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.17■□□□□ 0.5
USP1O94782 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP1O94782 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP1O94782 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP1O94782 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.16■□□□□ 0.5
USP1O94782 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP1O94782 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.16■□□□□ 0.5
USP1O94782 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP1O94782 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP1O94782 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP1O94782 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.16■□□□□ 0.5
USP1O94782 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP1O94782 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP1O94782 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.16■□□□□ 0.5
USP1O94782 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP1O94782 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.16■□□□□ 0.5
USP1O94782 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.16■□□□□ 0.5
USP1O94782 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.16■□□□□ 0.5
USP1O94782 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.16■□□□□ 0.5
USP1O94782 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
USP1O94782 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.16■□□□□ 0.5
USP1O94782 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
USP1O94782 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
USP1O94782 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.16■□□□□ 0.5
USP1O94782 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
USP1O94782 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.16■□□□□ 0.5
USP1O94782 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP1O94782 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP1O94782 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP1O94782 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP1O94782 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP1O94782 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
USP1O94782 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP1O94782 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP1O94782 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP1O94782 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
USP1O94782 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP1O94782 LINC00167-201ENST00000530583 1419 ntBASIC18.15■□□□□ 0.5
USP1O94782 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.15■□□□□ 0.5
USP1O94782 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms