Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCP110O43303 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCP110O43303 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCP110O43303 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCP110O43303 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCP110O43303 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCP110O43303 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.77■□□□□ 0.76
CCP110O43303 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCP110O43303 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCP110O43303 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCP110O43303 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCP110O43303 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCP110O43303 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCP110O43303 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCP110O43303 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCP110O43303 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCP110O43303 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CCP110O43303 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.77■□□□□ 0.76
CCP110O43303 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.77■□□□□ 0.76
CCP110O43303 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.77■□□□□ 0.76
CCP110O43303 AP003071.4-201ENST00000562276 1284 ntBASIC19.77■□□□□ 0.76
CCP110O43303 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.77■□□□□ 0.76
CCP110O43303 AP006294.2-201ENST00000641667 209 ntBASIC19.77■□□□□ 0.76
CCP110O43303 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCP110O43303 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCP110O43303 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.77■□□□□ 0.76
CCP110O43303 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCP110O43303 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CCP110O43303 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
CCP110O43303 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CCP110O43303 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCP110O43303 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
CCP110O43303 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 AC096733.2-201ENST00000609937 1394 ntBASIC19.76■□□□□ 0.75
CCP110O43303 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCP110O43303 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCP110O43303 SNORA78-201ENST00000459373 127 ntBASIC19.76■□□□□ 0.75
CCP110O43303 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.76■□□□□ 0.75
CCP110O43303 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.76■□□□□ 0.75
CCP110O43303 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.76■□□□□ 0.75
CCP110O43303 SLC25A1P4-201ENST00000567977 778 ntBASIC19.76■□□□□ 0.75
CCP110O43303 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CCP110O43303 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.76■□□□□ 0.75
CCP110O43303 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.76■□□□□ 0.75
CCP110O43303 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CCP110O43303 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCP110O43303 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCP110O43303 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CCP110O43303 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCP110O43303 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCP110O43303 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CCP110O43303 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.75■□□□□ 0.75
CCP110O43303 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCP110O43303 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.75■□□□□ 0.75
CCP110O43303 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CCP110O43303 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.75■□□□□ 0.75
CCP110O43303 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCP110O43303 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCP110O43303 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCP110O43303 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.75■□□□□ 0.75
CCP110O43303 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCP110O43303 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.75■□□□□ 0.75
CCP110O43303 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCP110O43303 MFAP1P1-201ENST00000442257 1255 ntBASIC19.75■□□□□ 0.75
CCP110O43303 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.75■□□□□ 0.75
CCP110O43303 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.75■□□□□ 0.75
CCP110O43303 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCP110O43303 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.75■□□□□ 0.75
CCP110O43303 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.75■□□□□ 0.75
CCP110O43303 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCP110O43303 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
CCP110O43303 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCP110O43303 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCP110O43303 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCP110O43303 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCP110O43303 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.75■□□□□ 0.75
CCP110O43303 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCP110O43303 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCP110O43303 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
CCP110O43303 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCP110O43303 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.75■□□□□ 0.75
CCP110O43303 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCP110O43303 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.74■□□□□ 0.75
CCP110O43303 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms