Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A1O14983 AC010460.3-201ENST00000511359 1579 ntBASIC20.48■□□□□ 0.87
ATP2A1O14983 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A1O14983 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
ATP2A1O14983 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A1O14983 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ATP2A1O14983 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A1O14983 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.48■□□□□ 0.87
ATP2A1O14983 RPS2P1-201ENST00000434010 821 ntBASIC20.48■□□□□ 0.87
ATP2A1O14983 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.48■□□□□ 0.87
ATP2A1O14983 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.48■□□□□ 0.87
ATP2A1O14983 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.48■□□□□ 0.87
ATP2A1O14983 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
ATP2A1O14983 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.48■□□□□ 0.87
ATP2A1O14983 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A1O14983 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A1O14983 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A1O14983 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ATP2A1O14983 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
ATP2A1O14983 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.48■□□□□ 0.87
ATP2A1O14983 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A1O14983 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A1O14983 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A1O14983 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A1O14983 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A1O14983 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
ATP2A1O14983 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A1O14983 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A1O14983 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.47■□□□□ 0.87
ATP2A1O14983 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.47■□□□□ 0.87
ATP2A1O14983 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.47■□□□□ 0.87
ATP2A1O14983 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A1O14983 OR7E14P-202ENST00000530490 1290 ntBASIC20.47■□□□□ 0.87
ATP2A1O14983 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
ATP2A1O14983 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.47■□□□□ 0.87
ATP2A1O14983 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.47■□□□□ 0.87
ATP2A1O14983 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A1O14983 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.47■□□□□ 0.87
ATP2A1O14983 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.47■□□□□ 0.87
ATP2A1O14983 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A1O14983 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A1O14983 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A1O14983 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A1O14983 AC022898.2-201ENST00000616822 1312 ntBASIC20.47■□□□□ 0.87
ATP2A1O14983 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A1O14983 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A1O14983 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A1O14983 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.47■□□□□ 0.87
ATP2A1O14983 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A1O14983 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
ATP2A1O14983 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP2A1O14983 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.46■□□□□ 0.87
ATP2A1O14983 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A1O14983 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.46■□□□□ 0.87
ATP2A1O14983 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.46■□□□□ 0.87
ATP2A1O14983 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.46■□□□□ 0.87
ATP2A1O14983 HLA-J-201ENST00000462773 1622 ntBASIC20.46■□□□□ 0.87
ATP2A1O14983 AC079776.2-201ENST00000641154 1609 ntBASIC20.46■□□□□ 0.87
ATP2A1O14983 RNF165-205ENST00000588679 2904 ntBASIC20.46■□□□□ 0.87
ATP2A1O14983 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A1O14983 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A1O14983 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A1O14983 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.46■□□□□ 0.87
ATP2A1O14983 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.46■□□□□ 0.87
ATP2A1O14983 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.46■□□□□ 0.87
ATP2A1O14983 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A1O14983 AC008735.5-201ENST00000623544 497 ntBASIC20.46■□□□□ 0.87
ATP2A1O14983 AC107918.4-202ENST00000641623 219 ntBASIC20.46■□□□□ 0.87
ATP2A1O14983 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A1O14983 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A1O14983 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.46■□□□□ 0.87
ATP2A1O14983 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A1O14983 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.46■□□□□ 0.87
ATP2A1O14983 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A1O14983 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A1O14983 ZNF259P1-201ENST00000407656 1365 ntBASIC20.46■□□□□ 0.87
ATP2A1O14983 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP2A1O14983 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
ATP2A1O14983 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
ATP2A1O14983 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.45■□□□□ 0.86
ATP2A1O14983 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2A1O14983 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.45■□□□□ 0.86
ATP2A1O14983 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
ATP2A1O14983 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2A1O14983 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2A1O14983 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.45■□□□□ 0.86
ATP2A1O14983 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.45■□□□□ 0.86
ATP2A1O14983 COX5BP2-201ENST00000392354 334 ntBASIC20.45■□□□□ 0.86
ATP2A1O14983 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ATP2A1O14983 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.45■□□□□ 0.86
ATP2A1O14983 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.45■□□□□ 0.86
ATP2A1O14983 AC012640.2-201ENST00000561606 901 ntBASIC20.45■□□□□ 0.86
ATP2A1O14983 MTDHP4-201ENST00000600287 670 ntBASIC20.45■□□□□ 0.86
ATP2A1O14983 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2A1O14983 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ATP2A1O14983 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ATP2A1O14983 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ATP2A1O14983 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2A1O14983 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATP2A1O14983 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms