Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFRSF11BO00300 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 AC011676.5-201ENST00000624864 2660 ntBASIC16.61■□□□□ 0.25
TNFRSF11BO00300 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 AC100803.2-201ENST00000562459 1963 ntBASIC16.61■□□□□ 0.25
TNFRSF11BO00300 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 ID1-201ENST00000376105 1233 ntBASIC16.61■□□□□ 0.25
TNFRSF11BO00300 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 NUDT16P1-203ENST00000513809 620 ntBASIC16.61■□□□□ 0.25
TNFRSF11BO00300 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 FAM197Y4-202ENST00000622692 608 ntBASIC16.61■□□□□ 0.25
TNFRSF11BO00300 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 AL135905.2-201ENST00000584934 1404 ntBASIC16.61■□□□□ 0.25
TNFRSF11BO00300 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TNFRSF11BO00300 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 AL121761.2-201ENST00000598007 1648 ntBASIC16.6■□□□□ 0.25
TNFRSF11BO00300 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF11BO00300 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF11BO00300 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms