Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPA3F8WFD2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.36■□□□□ 0.21
NPIPA3F8WFD2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 FDX1P1-201ENST00000449115 551 ntBASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 AL031008.1-201ENST00000619963 541 ntBASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPA3F8WFD2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 TSPY12P-201ENST00000421279 868 ntBASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 AC079781.3-201ENST00000449110 356 ntBASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 AL353801.3-201ENST00000609898 542 ntBASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.34■□□□□ 0.21
NPIPA3F8WFD2 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.33■□□□□ 0.21
NPIPA3F8WFD2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
NPIPA3F8WFD2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPA3F8WFD2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPA3F8WFD2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.33■□□□□ 0.21
NPIPA3F8WFD2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.33■□□□□ 0.21
NPIPA3F8WFD2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPA3F8WFD2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms