Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SRRM4A7MD48 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.47□□□□□ -0.09
SRRM4A7MD48 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRRM4A7MD48 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRRM4A7MD48 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SRRM4A7MD48 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRRM4A7MD48 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRRM4A7MD48 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRRM4A7MD48 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRRM4A7MD48 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.47□□□□□ -0.09
SRRM4A7MD48 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SRRM4A7MD48 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.47□□□□□ -0.09
SRRM4A7MD48 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRRM4A7MD48 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SRRM4A7MD48 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRRM4A7MD48 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRRM4A7MD48 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRRM4A7MD48 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
SRRM4A7MD48 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.47□□□□□ -0.09
SRRM4A7MD48 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SRRM4A7MD48 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SRRM4A7MD48 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SRRM4A7MD48 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRRM4A7MD48 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SRRM4A7MD48 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.46□□□□□ -0.09
SRRM4A7MD48 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRRM4A7MD48 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRRM4A7MD48 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRRM4A7MD48 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SRRM4A7MD48 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRRM4A7MD48 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SRRM4A7MD48 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.46□□□□□ -0.09
SRRM4A7MD48 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRRM4A7MD48 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SRRM4A7MD48 SPDYE15P-201ENST00000424157 909 ntBASIC14.46□□□□□ -0.09
SRRM4A7MD48 BX664615.1-201ENST00000443558 458 ntBASIC14.46□□□□□ -0.09
SRRM4A7MD48 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.46□□□□□ -0.09
SRRM4A7MD48 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.46□□□□□ -0.09
SRRM4A7MD48 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SRRM4A7MD48 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SRRM4A7MD48 AC113404.2-201ENST00000507884 177 ntBASIC14.46□□□□□ -0.09
SRRM4A7MD48 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.46□□□□□ -0.09
SRRM4A7MD48 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.46□□□□□ -0.09
SRRM4A7MD48 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SRRM4A7MD48 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SRRM4A7MD48 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.46□□□□□ -0.09
SRRM4A7MD48 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
SRRM4A7MD48 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.46□□□□□ -0.09
SRRM4A7MD48 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SRRM4A7MD48 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.46□□□□□ -0.09
SRRM4A7MD48 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.46□□□□□ -0.09
SRRM4A7MD48 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SRRM4A7MD48 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SRRM4A7MD48 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SRRM4A7MD48 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SRRM4A7MD48 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
SRRM4A7MD48 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.46□□□□□ -0.1
SRRM4A7MD48 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SRRM4A7MD48 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SRRM4A7MD48 AL355312.1-201ENST00000407115 2176 ntBASIC14.46□□□□□ -0.1
SRRM4A7MD48 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
SRRM4A7MD48 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.45□□□□□ -0.1
SRRM4A7MD48 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.45□□□□□ -0.1
SRRM4A7MD48 AC022898.2-201ENST00000616822 1312 ntBASIC14.45□□□□□ -0.1
SRRM4A7MD48 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.45□□□□□ -0.1
SRRM4A7MD48 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.45□□□□□ -0.1
SRRM4A7MD48 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SRRM4A7MD48 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SRRM4A7MD48 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SRRM4A7MD48 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 AC005521.1-201ENST00000393351 872 ntBASIC14.45□□□□□ -0.1
SRRM4A7MD48 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.45□□□□□ -0.1
SRRM4A7MD48 YBX1P2-201ENST00000489612 999 ntBASIC14.45□□□□□ -0.1
SRRM4A7MD48 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.45□□□□□ -0.1
SRRM4A7MD48 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.45□□□□□ -0.1
SRRM4A7MD48 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 AL136038.4-201ENST00000603606 1261 ntBASIC14.45□□□□□ -0.1
SRRM4A7MD48 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.45□□□□□ -0.1
SRRM4A7MD48 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SRRM4A7MD48 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.45□□□□□ -0.1
SRRM4A7MD48 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.45□□□□□ -0.1
SRRM4A7MD48 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.45□□□□□ -0.1
SRRM4A7MD48 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SRRM4A7MD48 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SRRM4A7MD48 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SRRM4A7MD48 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms