Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 AC005363.2-201ENST00000618631 242 ntBASIC20.51■□□□□ 0.87
CLIC4Q9Y696 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.51■□□□□ 0.87
CLIC4Q9Y696 AC022898.2-201ENST00000616822 1312 ntBASIC20.51■□□□□ 0.87
CLIC4Q9Y696 AC106820.2-201ENST00000563775 3264 ntBASIC20.51■□□□□ 0.87
CLIC4Q9Y696 AC009949.1-201ENST00000623048 1830 ntBASIC20.5■□□□□ 0.87
CLIC4Q9Y696 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 AC005521.1-201ENST00000393351 872 ntBASIC20.5■□□□□ 0.87
CLIC4Q9Y696 AC117947.1-201ENST00000427448 529 ntBASIC20.5■□□□□ 0.87
CLIC4Q9Y696 AL137013.1-201ENST00000432946 1228 ntBASIC20.5■□□□□ 0.87
CLIC4Q9Y696 HLA-F-220ENST00000434407 884 ntBASIC20.5■□□□□ 0.87
CLIC4Q9Y696 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.5■□□□□ 0.87
CLIC4Q9Y696 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 YBX1P2-201ENST00000489612 999 ntBASIC20.5■□□□□ 0.87
CLIC4Q9Y696 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 AC012313.1-201ENST00000593393 3059 ntBASIC20.5■□□□□ 0.87
CLIC4Q9Y696 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.5■□□□□ 0.87
CLIC4Q9Y696 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CLIC4Q9Y696 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 KRT8P47-201ENST00000604727 1398 ntBASIC20.48■□□□□ 0.87
CLIC4Q9Y696 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 KRT18P38-201ENST00000449496 1282 ntBASIC20.48■□□□□ 0.87
CLIC4Q9Y696 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.48■□□□□ 0.87
CLIC4Q9Y696 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms